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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
79.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
65.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
59.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
59.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
58.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
55.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
54.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
51.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
45.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
43.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
42.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
41.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
39.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
39.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
38.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
38.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
35.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
34.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
34.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
34.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
33.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
29.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
28.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
27.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
27.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
84.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
72.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
70.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
70.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
70.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
70.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
69.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
69.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
69.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
69.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
68.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
68.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
67.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
67.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
66.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
66.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
66.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
66.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
65.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
65.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
65.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
64.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
64.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
63.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
63.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
63.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
63.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
63.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
63.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
62.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
62.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
62.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
61.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
61.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
61.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
61.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
61.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
60.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
60.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
60.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
60.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
60.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
60.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
60.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
60.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
59.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
59.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
59.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
59.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
59.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
59.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
59.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
59.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
59.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
59.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
58.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
58.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
58.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
58.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
58.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
58.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
58.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
58.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
58.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
58.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
57.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
57.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
57.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
57.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
57.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
57.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
57.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
57.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
57.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
56.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
56.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
56.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
56.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
56.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
56.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
56.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
56.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
56.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
56.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
56.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
55.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
55.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
55.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
55.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
55.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
55.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
55.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
55.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
55.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
55.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
55.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
55.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
54.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
54.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
54.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
54.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
54.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
54.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
54.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
54.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
54.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
54.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
53.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
53.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
53.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
53.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
53.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
53.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
53.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
53.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
53.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
53.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
53.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
53.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
53.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
53.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
53.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
52.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
52.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
52.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
52.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
52.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
52.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
52.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
52.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
52.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
52.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
52.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
52.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
52.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
52.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
51.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
51.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
51.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
51.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
51.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
51.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
51.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
51.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
51.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
51.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
51.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
51.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
50.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
50.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
50.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
50.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
50.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
50.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
50.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
50.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
50.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
50.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
50.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
50.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
50.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
50.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
49.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
49.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
49.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
49.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
49.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
49.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
49.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
49.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
49.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
49.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
48.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
48.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
48.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
48.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
48.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
48.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
48.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
48.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
48.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
48.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
48.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
48.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
48.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
48.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
48.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
47.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
47.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
47.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
47.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
47.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
47.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
47.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
47.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
47.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
47.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
47.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
46.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
46.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
46.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
46.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
46.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
46.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
46.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
46.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
46.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
46.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
46.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
46.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
46.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
46.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
46.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
45.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
45.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
45.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
45.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
45.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
45.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
45.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
45.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
45.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
45.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
45.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
45.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
45.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
44.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
44.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
44.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
44.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
44.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
44.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
44.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
44.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
44.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
43.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
43.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
43.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
43.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
43.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
42.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
42.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
42.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
42.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
42.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
42.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
42.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
42.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
41.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
41.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
41.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
41.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
41.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
41.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
40.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
40.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
40.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
40.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
40.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
40.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
40.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
40.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
40.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
39.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
39.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
39.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
39.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
39.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
39.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
38.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
38.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
38.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
38.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
37.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
37.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
37.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
37.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
37.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
36.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
36.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
36.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
36.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
36.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
36.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
35.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
35.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
35.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
35.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
34.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
34.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
33.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
33.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
33.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
32.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
32.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
32.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
32.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
32.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
32.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
32.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
32.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
31.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
31.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
30.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
30.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
29.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
29.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
29.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
29.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
27.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
26.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
24.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
23.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
22.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
21.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
21.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
20.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
19.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
75.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
71.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
69.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
68.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
66.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
66.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
63.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
62.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
62.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
61.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
60.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
59.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
59.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
59.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
58.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
58.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
56.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
55.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
55.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
55.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
52.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
51.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
51.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
51.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
51.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
50.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
50.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
49.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
49.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
48.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
48.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
47.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
46.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
46.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
44.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
44.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
44.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
43.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
43.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
42.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
41.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
39.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
36.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
34.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
30.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
29.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
25.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRAPPC3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
104.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
99.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
92.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
90.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
85.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
83.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
81.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
81.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
79.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
79.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
79.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
79.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
77.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
77.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
76.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
75.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
73.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
73.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
72.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
71.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
71.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
70.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
68.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
68.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
68.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
67.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
67.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
67.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
67.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
67.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
66.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
65.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
64.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
64.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
64.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
63.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
63.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
63.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
63.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
62.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
62.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
62.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
61.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
61.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
61.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
61.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
61.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
61.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
61.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
61.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
61.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
60.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
60.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
60.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
60.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
59.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
59.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
59.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
59.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
59.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
59.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
59.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
59.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
59.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
58.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
58.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
58.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
58.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
58.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
58.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
57.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
57.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
57.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
57.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
57.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
57.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
57.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
57.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
57.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
57.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
57.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
56.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
56.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
56.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
55.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
55.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
55.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
55.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
55.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
55.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
55.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
55.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
54.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
54.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
54.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
54.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
54.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
54.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
54.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
53.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
53.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
53.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
53.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
53.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
53.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
52.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
52.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
52.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
52.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
52.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
51.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
51.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
51.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
51.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
51.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
51.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
50.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
50.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
50.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
50.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
50.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
50.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
49.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
49.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
49.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
49.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
49.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
48.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
48.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
48.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
48.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
48.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
47.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
47.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
47.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
47.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
47.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
47.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
47.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
46.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
46.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
46.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
46.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
46.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
46.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
46.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
45.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
45.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
45.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
45.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
45.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
45.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
45.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
44.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
44.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
44.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
44.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
44.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
44.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
44.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
43.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
43.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
43.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
43.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
42.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
42.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
42.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
42.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
42.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
42.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
41.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
41.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
41.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
41.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
41.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
41.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
40.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
40.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
40.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
40.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
39.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
39.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
39.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
39.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
39.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
39.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
39.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
39.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
38.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
37.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
36.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
36.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
36.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
36.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
36.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
36.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
35.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
34.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
33.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
33.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
32.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
32.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
31.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
31.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
31.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
30.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
25.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
24.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
24.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.8
CPT0078660003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0012770003
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0012570003
Normal
0.5
CPT0017450001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0025610001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0009020003
Normal
0.3
CPT0089040001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0082010001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0012290003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0012640003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0006950001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0069190001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0078670001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0092800003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0012670003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0079510001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0025290003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0014370004
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0088690003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0015810003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0065750003
Tumor
-0.9
CPT0086030003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
