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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USE1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
61.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
54.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
42.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
42.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
41.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
38.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
37.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
36.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
33.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
31.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
30.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
25.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
25.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
24.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
21.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
21.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
17.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USE1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
113.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
86.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
86.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
81.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
77.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
76.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
74.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
73.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
73.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
72.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
71.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
71.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
71.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
71.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
71.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
70.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
70.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
70.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
69.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
69.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
69.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
68.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
68.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
68.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
67.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
67.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
66.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
66.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
65.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
65.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
64.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
64.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
64.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
63.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
63.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
62.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
61.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
61.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
61.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
61.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
60.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
60.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
60.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
60.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
60.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
60.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
60.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
60.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
60.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
60.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
60.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
59.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
59.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
59.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
59.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
59.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
58.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
58.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
58.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
58.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
58.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
58.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
57.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
57.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
57.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
57.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
57.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
56.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
56.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
56.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
56.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
55.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
55.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
55.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
55.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
55.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
54.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
54.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
54.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
54.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
54.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
54.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
53.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
53.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
53.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
53.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
53.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
52.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
52.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
52.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
52.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
52.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
51.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
51.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
51.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
51.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
51.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
51.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
50.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
50.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
50.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
50.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
50.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
50.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
50.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
49.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
49.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
49.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
49.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
49.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
49.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
49.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
48.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
48.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
48.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
48.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
48.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
48.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
48.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
48.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
48.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
48.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
48.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
48.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
48.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
48.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
48.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
47.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
47.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
47.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
47.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
47.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
47.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
47.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
47.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
46.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
46.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
46.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
46.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
46.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
46.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
46.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
46.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
46.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
46.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
45.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
45.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
45.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
45.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
45.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
45.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
45.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
45.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
45.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
45.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
45.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
45.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
45.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
45.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
45.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
45.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
45.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
44.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
44.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
44.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
44.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
44.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
44.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
43.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
43.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
43.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
43.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
43.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
43.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
43.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
43.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
43.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
42.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
42.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
42.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
42.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
42.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
42.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
42.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
42.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
42.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
42.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
42.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
41.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
41.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
41.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
41.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
41.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
41.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
41.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
40.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
40.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
40.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
40.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
40.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
40.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
40.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
40.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
40.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
40.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
40.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
40.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
40.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
39.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
39.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
39.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
39.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
39.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
39.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
39.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
39.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
39.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
39.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
38.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
38.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
38.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
38.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
38.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
38.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
37.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
37.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
37.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
37.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
37.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
36.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
36.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
36.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
36.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
36.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
36.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
36.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
35.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
35.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
35.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
34.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
34.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
34.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
34.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
33.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
33.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
33.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
32.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
32.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
32.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
32.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
32.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
32.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
32.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
32.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
32.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
31.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
30.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
30.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
29.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
28.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
28.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
27.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
25.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
25.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
24.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
24.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
23.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
21.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
21.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
20.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USE1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
85.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
71.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
60.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
58.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
57.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
55.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
54.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
51.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
49.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
49.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
49.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
49.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
48.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
43.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
43.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
42.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
42.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
42.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
41.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
41.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
40.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
38.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
36.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
35.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
35.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
33.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
32.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
32.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
30.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
26.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
22.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USE1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
142.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
99.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
92.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
80.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
63.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
60.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
58.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
58.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
57.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
57.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
57.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
56.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
55.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
53.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
52.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
51.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
50.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
49.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
49.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
49.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
48.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
48.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
48.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
47.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
47.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
47.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
46.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
45.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
44.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
43.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
43.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
43.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
42.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
41.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
41.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
40.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
40.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
40.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
40.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
40.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
39.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
39.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
38.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
38.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
38.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
38.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
37.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
37.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
37.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
36.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
36.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
36.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
36.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
36.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
35.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
35.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
34.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
34.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
34.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
34.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
34.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
33.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
33.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
33.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
33.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
33.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
31.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
30.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
30.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
30.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
30.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
30.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
29.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
29.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
28.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
28.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
28.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
27.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
26.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
26.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
26.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
24.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
24.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
21.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
21.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
4.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
2.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
2.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0086950003
Tumor
0.8
CPT0025110003
Tumor
0.7
CPT0079270003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0002270011
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0092800003
Normal
0.5
CPT0078830003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0007320003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0092310003
Normal
0.4
CPT0024670003
Tumor
0.4
CPT0089480003
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0088710001
Normal
0.3
CPT0078990003
Tumor
0.3
CPT0079430001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0088630003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0001350001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0086970003
Normal
0.2
CPT0010170001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0020020001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0063630003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0025060001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0076350001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0001540009
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0010120001
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0078510003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0020120003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0009020003
Normal
-0.4
CPT0066480003
Tumor
-0.4
CPT0012670003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0017850003
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0018250001
Normal
-0.7
CPT0012920003
Normal
-0.7
CPT0009060003
Tumor
-0.8
CPT0011240003
Tumor
-1.0
CPT0017410003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
