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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP16 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
102.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
63.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
46.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
46.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
44.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
37.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
35.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
29.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
29.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
25.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
9.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP16 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
78.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
77.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
72.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
70.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
66.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
64.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
64.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
61.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
60.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
60.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
59.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
56.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
55.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
54.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
54.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
53.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
51.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
49.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
49.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
49.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
48.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
48.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
46.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
45.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
44.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
44.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
44.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
44.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
43.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
43.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
42.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
42.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
42.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
42.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
42.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
41.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
40.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
40.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
39.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
39.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
39.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
39.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
39.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
39.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
39.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
38.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
38.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
38.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
38.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
38.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
37.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
37.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
37.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
36.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
36.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
36.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
36.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
35.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
35.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
33.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
33.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
32.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
32.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
32.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
32.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
31.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
31.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
31.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
31.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
30.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
30.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
30.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
30.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
30.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
30.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
30.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
30.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
29.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
29.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
29.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
29.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
29.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
28.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
28.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
28.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
28.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
28.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
28.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
28.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
27.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
27.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
27.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
27.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
26.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
26.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
26.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
26.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
25.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
25.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
24.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
24.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
24.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
23.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
22.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
22.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
22.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
22.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
21.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
21.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
21.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
21.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
16.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
16.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP16 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
76.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
58.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
51.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
48.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
43.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
42.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
40.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
39.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
35.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
35.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
34.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
32.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
31.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
30.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
30.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
29.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
26.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
21.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOP16 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
83.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
83.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
81.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
77.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
76.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
76.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
69.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
67.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
64.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
59.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
59.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
54.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
53.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
50.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
47.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
46.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
46.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
45.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
45.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
44.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
43.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
42.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
42.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
40.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
38.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
37.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
37.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
37.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
35.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
35.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
34.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
34.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
33.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
31.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
31.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
31.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
31.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
29.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
28.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
28.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
27.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
27.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
27.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
27.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
26.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
25.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
25.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
24.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
24.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
24.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
22.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
22.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
21.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
21.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
20.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
20.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
20.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
19.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
18.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
15.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
14.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
13.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
13.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
13.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
8.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086870003
Tumor
1.2
CPT0023350003
Tumor
1.2
CPT0001340003
Tumor
1.1
CPT0079410003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0065430003
Tumor
0.8
CPT0001260009
Tumor
0.8
CPT0002350011
Tumor
0.8
CPT0014450004
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0089460004
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0085670003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0017850003
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0009000003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0012670003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0021240003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0065810003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0071150004
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0088970003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0019130003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0075560003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0023710001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0065870003
Tumor
-0.4
CPT0088570001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0079510001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0017450001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0000890001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0088550004
Tumor
-0.5
CPT0012920003
Normal
-0.5
CPT0025290003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0001350001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0075570001
Normal
-0.5
CPT0075170001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0077140001
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0006950001
Normal
-0.5
CPT0019160001
Normal
-0.6
CPT0006530001
Normal
-0.6
CPT0063640001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0078530001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0002370001
Normal
-0.6
CPT0000660001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0009020003
Normal
-0.7
CPT0066430001
Normal
-0.7
CPT0026420001
Normal
-0.7
CPT0088500001
Normal
-0.7
CPT0063330001
Normal
-0.8
CPT0025920001
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
