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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
239.0
nTPM
GTEx:
239.0
nTPM
FANTOM5:
147.8
Scaled Tags Per Million
Pig:
7.5
nTPM
Mouse:
128.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
239.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 239.0
Samples: 105
Max nTPM: 1105.3
Min nTPM: 35.6
Std nTPM: 170.2
Median nTPM:
308_1
70 years, female
1105.3
490_1
67 years, female
803.3
491_1
89 years, female
738.9
384_1
83 years, male
571.4
41_1
94 years, female
555.6
307_1
66 years, female
547.9
119_1
70 years, female
545.4
313_1
79 years, female
523.8
314_1
67 years, male
508.5
4_1
88 years, female
458.9
447_1
81 years, male
458.4
89_1
63 years, male
443.6
42_1
85 years, male
436.3
117_1
61 years, male
406.2
315_1
62 years, female
395.8
145_1
84 years, male
383.9
137_1
83 years, male
376.3
311_1
78 years, male
364.3
317_1
60 years, male
348.1
139_1
64 years, female
345.5
501_1
88 years, male
342.7
293_1
68 years, female
335.9
348_1
84 years, male
329.5
173_1
67 years, male
329.3
526_1
61 years, male
326.6
120_1
70 years, female
313.3
288_1
66 years, female
304.8
351_1
91 years, male
287.9
254_1
77 years, female
278.5
17_1
71 years, male
272.1
295_1
61 years, female
266.8
324_1
76 years, male
265.8
452_1
88 years, female
257.8
2_1
77 years, female
254.8
495_1
57 years, female
253.7
321_1
62 years, female
247.4
375_1
74 years, female
243.2
347_1
72 years, male
242.2
237_1
82 years, male
240.0
322_1
76 years, male
233.6
291_1
76 years, male
229.2
320_1
89 years, female
229.1
43_1
64 years, female
229.0
389_1
86 years, female
222.0
415_1
77 years, female
219.1
126_1
63 years, male
215.9
414_1
84 years, female
215.6
99_1
64 years, male
211.1
319_1
81 years, male
206.7
81_1
67 years, male
205.5
264_1
73 years, female
205.3
480_1
63 years, male
202.4
350_1
84 years, female
202.1
353_1
82 years, female
190.7
6_1
73 years, female
188.7
218_1
71 years, female
185.7
396_1
62 years, male
181.4
35_1
74 years, female
180.2
189_1
76 years, male
177.7
406_1
79 years, male
174.8
153_1
70 years, female
172.1
379_1
60 years, male
161.3
109_1
81 years, female
160.8
466_1
57 years, female
157.4
149_1
88 years, male
153.0
142_1
61 years, female
152.2
172_1
72 years, female
151.9
18_1
88 years, male
151.5
394_1
75 years, female
146.8
32_1
67 years, male
142.6
349_1
83 years, male
142.6
413_1
59 years, female
139.7
115_1
83 years, male
139.4
518_1
75 years, female
138.9
386_1
76 years, male
133.5
354_1
81 years, female
132.2
499_1
55 years, female
131.7
356_1
87 years, female
128.7
265_1
87 years, male
126.4
376_1
75 years, female
125.7
162_1
79 years, female
124.8
251_1
78 years, male
121.3
503_1
68 years, male
118.6
243_1
75 years, male
118.4
468_1
89 years, male
115.4
506_1
65 years, male
111.9
316_1
62 years, male
103.4
217_1
76 years, male
102.0
9_1
66 years, female
101.3
405_1
91 years, male
98.4
377_1
82 years, female
96.8
318_1
68 years, male
92.3
517_1
88 years, male
91.9
246_1
77 years, male
90.4
266_1
85 years, male
88.9
163_1
78 years, male
83.0
286_1
68 years, female
78.4
404_1
82 years, female
76.7
292_1
71 years, male
66.4
355_1
70 years, female
64.9
177_1
74 years, male
63.5
425_1
59 years, female
54.1
335_1
73 years, female
50.7
229_1
69 years, female
43.7
352_1
62 years, male
35.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.