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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PNKP is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
254
Samples
Sample
Description
TPM
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
53.1
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
45.9
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
44.4
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
43.0
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
39.8
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
38.9
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
38.7
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
38.5
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
38.5
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
38.2
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
37.7
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
37.4
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
36.8
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
36.5
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
36.4
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
35.7
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
34.5
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
34.2
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
34.1
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
34.0
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
34.0
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
34.0
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
33.5
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
33.1
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
33.0
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
32.9
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
32.9
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
32.7
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
32.0
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
32.0
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
31.8
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
31.5
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
31.0
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
31.0
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
30.9
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
30.7
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
30.6
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
30.4
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
30.0
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
29.9
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
29.6
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
29.2
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
29.1
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
29.1
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
29.0
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
28.9
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
28.7
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
28.6
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
28.6
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
28.3
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
28.1
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
28.1
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
28.1
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
28.0
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
27.7
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
27.7
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
27.7
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
27.6
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
27.5
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
27.4
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
27.4
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
27.4
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
27.3
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
27.0
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
27.0
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
26.9
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
26.8
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
26.7
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
26.7
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
26.5
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
26.5
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
26.4
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
26.2
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
26.2
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
26.2
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
26.2
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
26.2
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
26.2
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
26.2
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
25.9
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
25.9
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
25.7
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
25.5
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
25.5
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
25.2
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
25.1
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
24.9
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
24.8
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
24.8
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
24.7
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
24.6
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
24.5
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
24.5
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
24.5
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
24.5
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
24.5
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
24.5
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
24.4
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
24.4
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
24.3
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
24.2
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
24.1
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
24.1
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
24.0
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
24.0
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
23.9
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
23.9
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
23.8
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
23.7
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
23.6
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
23.6
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
23.5
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
23.5
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
23.4
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
23.4
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
23.3
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
23.3
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
23.2
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
23.2
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
23.0
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
22.9
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
22.9
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
22.8
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
22.8
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
22.7
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
22.4
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
22.3
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
22.2
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
22.2
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
22.2
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
22.1
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
22.0
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
22.0
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
21.9
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
21.7
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
21.7
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
21.7
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
21.6
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
21.5
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
21.3
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
21.2
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
21.2
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
21.1
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
21.1
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.0
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
21.0
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
20.8
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
20.8
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
20.6
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
20.5
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
20.4
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
20.3
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
20.2
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
20.1
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
20.1
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
20.1
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
20.0
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
19.9
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
19.8
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
19.7
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
19.6
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
19.6
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
19.5
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
19.5
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
19.5
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
19.5
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
19.4
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
19.3
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
19.3
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
19.2
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
19.2
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
19.1
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
19.1
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
19.0
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
19.0
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
18.9
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
18.9
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
18.8
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
18.7
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
18.6
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
18.4
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
18.3
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
18.3
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
18.2
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
18.2
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
18.1
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
18.1
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
18.0
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
17.9
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
17.9
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
17.8
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
17.8
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
17.7
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
17.7
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
17.7
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
17.6
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
17.4
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
17.4
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
17.4
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
17.3
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
17.3
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
17.2
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
17.1
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
17.1
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
16.9
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
16.9
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
16.6
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
16.6
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
16.5
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
16.3
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
16.3
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
16.2
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
16.2
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
16.1
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
16.1
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
15.8
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
15.7
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
15.6
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
15.6
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
15.5
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
15.5
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
15.1
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
15.1
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
15.1
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
15.0
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
14.8
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
14.8
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
14.7
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
14.4
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
14.3
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
14.0
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
13.7
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
13.7
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
13.3
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
13.2
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
13.1
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
13.1
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
12.6
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
12.1
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
12.0
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
11.5
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
11.5
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
11.5
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
11.3
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
11.3
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
10.7
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
9.7
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
9.6
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
9.3
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
8.8
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
7.9
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
7.8
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
7.5
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PNKP is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
486
Samples
Sample
Description
TPM
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
49.6
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
40.1
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
39.8
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
39.0
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
38.9
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
38.7
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
38.5
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
38.0
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
36.9
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
36.7
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
36.5
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
36.5
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
36.2
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
35.3
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
35.1
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
34.9
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
34.6
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
34.4
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
34.0
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
33.4
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
33.0
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
32.9
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
32.7
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
32.6
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
32.5
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
32.5
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
32.5
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
32.5
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
32.0
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
31.6
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
31.5
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
31.0
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
30.9
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
30.8
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
30.7
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
30.6
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
30.4
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
30.3
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
30.2
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
30.2
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
29.9
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
29.9
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
29.9
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
29.9
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
29.5
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
29.5
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
29.5
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
29.3
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
29.1
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
28.8
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
28.7
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
28.6
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
28.6
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
28.5
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
28.4
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
28.4
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
28.3
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
28.3
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
28.3
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
28.1
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
27.9
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
27.8
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
27.7
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
27.6
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
27.5
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
27.4
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
27.4
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
27.3
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
27.2
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
27.2
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
26.8
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
26.7
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
26.7
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
26.6
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
26.6
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
26.5
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
26.5
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
26.4
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
26.4
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
26.4
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
26.0
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
25.8
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
25.7
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
25.6
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
25.5
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
25.4
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
25.4
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
25.4
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
25.3
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
25.1
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
25.0
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
24.8
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
24.8
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
24.6
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
24.6
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
24.5
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
24.4
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
24.4
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
24.4
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
24.3
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
24.2
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
24.0
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
24.0
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
24.0
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
24.0
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
24.0
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
23.9
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
23.9
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
23.9
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
23.8
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
23.8
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
23.7
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
23.5
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
23.5
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
23.5
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
23.4
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
23.4
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
23.4
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
23.3
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
23.2
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
23.1
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
23.1
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
23.1
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
23.1
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
23.1
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
23.0
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
22.9
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
22.9
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
22.9
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
22.9
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
22.8
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
22.8
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
22.7
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
22.6
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
22.5
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
22.5
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
22.5
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
22.5
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
22.5
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
22.5
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
22.4
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
22.3
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
22.3
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
22.3
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
22.2
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
22.2
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
22.2
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
22.2
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
22.1
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
22.1
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
22.1
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
22.0
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
21.9
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
21.9
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
21.8
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
21.8
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
21.8
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
21.7
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
21.7
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
21.7
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
21.6
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
21.6
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
21.5
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
21.5
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
21.4
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
21.4
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
21.4
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
21.3
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
21.3
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
21.3
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
21.2
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
21.2
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
21.1
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
21.1
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
21.0
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
21.0
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
21.0
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
21.0
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
21.0
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
20.9
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
20.8
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
20.8
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
20.8
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
20.8
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
20.7
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
20.6
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
20.6
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
20.6
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
20.5
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
20.5
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
20.4
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
20.3
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
20.2
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
20.2
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
20.2
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
20.2
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
20.2
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
20.1
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
20.1
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
20.0
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
20.0
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
20.0
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
20.0
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
19.8
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
19.8
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
19.8
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
19.8
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
19.8
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
19.8
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
19.7
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
19.7
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
19.6
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
19.6
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
19.6
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
19.6
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
19.6
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
19.5
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
19.5
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
19.5
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
19.5
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
19.5
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
19.5
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
19.5
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
19.4
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
19.4
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
19.4
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
19.4
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
19.4
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
19.4
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
19.3
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
19.3
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
19.3
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
19.3
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
19.2
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
19.2
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
19.1
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
19.1
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
19.0
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
19.0
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
19.0
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
19.0
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
18.9
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
18.9
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
18.8
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
18.8
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
18.7
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
18.6
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
18.6
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
18.6
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
18.5
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
18.5
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
18.5
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
18.5
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
18.5
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
18.4
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
18.4
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
18.4
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
18.4
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
18.4
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
18.3
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
18.3
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
18.3
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
18.2
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
18.2
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
18.2
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
18.2
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
18.1
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
18.1
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
18.0
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
17.9
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
17.8
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
17.8
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
17.8
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
17.8
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
17.7
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
17.7
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
17.6
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
17.5
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
17.5
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
17.5
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
17.4
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
17.4
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
17.4
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
17.4
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
17.3
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
17.3
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
17.3
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
17.3
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
17.3
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
17.2
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
17.2
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
17.1
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
16.9
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
16.9
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
16.9
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
16.9
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
16.8
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
16.8
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
16.7
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
16.7
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
16.6
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
16.6
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
16.6
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
16.6
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
16.5
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
16.5
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
16.5
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
16.5
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
16.4
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
16.4
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
16.4
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
16.4
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
16.4
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
16.3
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
16.3
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
16.3
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
16.2
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
16.2
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
16.2
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
16.2
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
16.2
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
16.1
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
16.1
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
16.1
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
16.1
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
16.1
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
16.1
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
16.1
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
16.1
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
16.0
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
16.0
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
16.0
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
16.0
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
15.9
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
15.9
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
15.9
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
15.9
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
15.9
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
15.9
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
15.9
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
15.8
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
15.8
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
15.8
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
15.7
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
15.7
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
15.6
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
15.6
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
15.6
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
15.6
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
15.6
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
15.5
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
15.5
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
15.5
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
15.5
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
15.5
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
15.4
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
15.4
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
15.4
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
15.4
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
15.3
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
15.3
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
15.3
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
15.2
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
15.2
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
15.2
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
15.2
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
15.2
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
15.2
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
15.2
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
15.1
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
15.1
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
15.1
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
15.0
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
14.9
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
14.9
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
14.9
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
14.9
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
14.9
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
14.9
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
14.8
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
14.8
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
14.8
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
14.8
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
14.8
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
14.8
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
14.8
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
14.7
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
14.7
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
14.7
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
14.7
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
14.7
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
14.6
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
14.6
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
14.6
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
14.5
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
14.5
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
14.5
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
14.5
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
14.4
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
14.4
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
14.3
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
14.3
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
14.2
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
14.2
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
14.1
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
14.1
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
14.1
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
14.1
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
14.0
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
13.9
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
13.8
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
13.8
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
13.8
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
13.7
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
13.7
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
13.6
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
13.5
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
13.4
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
13.4
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
13.4
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
13.4
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
13.3
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
13.3
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
13.2
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
13.2
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
13.2
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
13.2
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
13.1
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
13.0
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
12.9
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
12.8
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
12.7
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
12.7
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
12.6
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
12.6
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
12.6
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
12.6
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
12.6
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
12.6
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
12.5
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
12.5
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
12.4
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
12.4
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
12.3
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
12.3
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
12.2
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
12.2
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
12.2
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
11.8
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
11.8
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
11.8
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
11.7
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
11.7
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
11.5
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
11.5
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
11.5
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
11.3
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
11.2
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
11.0
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
10.9
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
10.8
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
10.8
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
10.7
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
10.7
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
10.6
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
10.5
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
10.2
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
9.9
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
9.9
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
9.9
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
9.8
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
9.7
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
9.5
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
9.4
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
9.3
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
9.0
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
8.7
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
8.6
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
8.3
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
8.3
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
8.1
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
7.8
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
7.2
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
1.3
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PNKP is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.0
Number of samples
88
Samples
Sample
Description
TPM
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
43.4
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
41.5
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
34.9
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
31.7
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
31.6
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
29.7
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
28.8
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
28.2
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
28.0
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
26.5
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
26.4
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
25.9
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
25.8
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
25.4
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
25.1
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
23.9
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
23.8
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
23.4
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
22.8
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
22.8
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
22.3
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
22.2
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
21.3
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
21.1
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
20.7
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
20.2
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
20.2
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
20.1
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
20.0
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
19.3
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
19.2
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
19.2
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
19.1
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
18.8
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
18.8
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
18.2
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
18.2
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
18.0
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
17.9
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
17.6
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
17.5
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
17.2
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
17.2
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
17.1
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
17.1
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
17.0
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
16.7
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
16.4
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
16.4
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
16.2
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
16.0
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
15.8
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
15.2
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
15.1
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
14.8
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
14.6
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
14.5
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
14.4
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
14.4
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
14.3
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
14.2
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
14.1
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
13.7
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
13.3
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
13.3
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
12.9
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
12.8
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
12.2
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
12.0
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
11.8
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
11.6
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
11.6
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
11.5
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
11.4
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
11.2
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
11.2
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
11.0
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
10.5
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
10.3
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
10.3
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
10.2
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
10.1
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
9.6
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
9.2
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
9.1
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
9.1
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
5.4
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PNKP is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
207
Samples
Sample
Description
TPM
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
39.2
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
38.7
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
37.0
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
35.9
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
35.7
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
34.7
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
33.2
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
31.6
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
31.3
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
31.3
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
30.0
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
29.3
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
29.1
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
28.7
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
28.0
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
27.8
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
27.6
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
27.4
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
27.1
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
26.8
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
26.2
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
26.1
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
25.9
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
25.8
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
25.7
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
25.6
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
25.5
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
25.1
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
24.8
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
24.7
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
24.4
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
24.3
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
24.1
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
23.9
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
23.6
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
23.6
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
23.5
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
23.4
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
23.2
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
23.1
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
23.0
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
23.0
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
22.9
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
22.9
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
22.9
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
22.6
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
22.5
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
22.5
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
22.4
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
22.3
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
22.2
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
22.2
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
22.2
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
21.9
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
21.9
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
21.8
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
21.8
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
21.8
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
21.7
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
21.6
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
21.5
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
21.5
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
21.4
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
21.3
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
21.2
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
21.2
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
21.1
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
21.0
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
20.9
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
20.7
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
20.7
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
20.7
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
20.6
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
20.4
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
20.3
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
20.3
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
20.2
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
20.1
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
20.1
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
20.0
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
20.0
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
19.8
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
19.8
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
19.8
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
19.5
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
19.2
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
19.2
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
19.1
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
19.1
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
19.0
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
19.0
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
19.0
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
18.9
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
18.8
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
18.7
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
18.7
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
18.7
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
18.6
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
18.5
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
18.3
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
18.3
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
18.3
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
18.3
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
18.2
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
18.0
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
17.9
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
17.9
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
17.8
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
17.7
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
17.4
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
17.2
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
17.2
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
17.2
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
17.1
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
17.0
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
16.9
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
16.8
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
16.8
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
16.7
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
16.7
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
16.6
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
16.5
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
16.5
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
16.5
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
16.5
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
16.3
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
16.2
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
16.2
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
16.2
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
16.2
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
16.1
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
16.1
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
16.0
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
16.0
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
15.9
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
15.8
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
15.6
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
15.5
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
15.4
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
15.3
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
15.3
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
15.3
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
15.2
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
15.2
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
15.2
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
15.1
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
15.1
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
15.0
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
14.9
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
14.7
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
14.5
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
14.5
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
14.4
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
14.4
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
14.4
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
14.3
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
14.2
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
14.2
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
14.0
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
14.0
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
13.7
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
13.7
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
13.4
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
13.4
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
13.4
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
13.4
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
13.4
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
13.3
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
13.2
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
13.1
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
13.1
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
12.9
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
12.8
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
12.7
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
12.6
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
12.6
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
12.6
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
12.4
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
12.4
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
12.2
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
12.2
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
12.2
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
12.0
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
11.9
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
11.7
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
11.6
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
11.6
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
11.5
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
11.5
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
11.4
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
11.1
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
11.0
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
10.9
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
10.8
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
10.6
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
10.5
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
10.3
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
10.2
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
10.2
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
9.6
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
8.8
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
8.4
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
8.4
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
8.3
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
8.3
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
6.4
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
4.8
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
c6ae57a7-65a0-438e-bae2-97b1c8_D3
Tumor
1.0
c1b66358-d103-493c-b8ec-92c43b_D1
Tumor
0.8
642fc6c3-8d4a-4e3d-ad0a-cc088a_D2
Tumor
0.6
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
0.6
f6afe41c-111d-4818-8485-fe95e0_D2
Tumor
0.5
66b829db-1cdd-460d-b2f3-0e9ca9_D3
Tumor
0.5
d3078fa8-0692-411f-8441-0c7c48_D8
Tumor
0.5
b2400046-1d25-429d-a821-6040a6
Tumor
0.5
b605fafc-f7dd-44cc-9c86-da04e3_D2
Tumor
0.5
e0068ac5-f557-443a-bd4b-bdfcef_D3
Tumor
0.4
dffcac99-9eac-4717-aeb6-f4a2e7_D8
Tumor
0.4
4bb08fad-fa5e-471e-978b-6b09ab_D2
Tumor
0.4
f69deaeb-6b6f-4c61-8900-fd0f26_D3
Tumor
0.4
37219a7c-6fe2-4684-a494-d0be08_D2
Tumor
0.4
f635496c-0046-4ecd-89bc-7a4f33_D2
Tumor
0.4
695b0b00-a86b-43c0-a6c8-50a840_D3
Tumor
0.3
6e20c8e9-ab75-4996-9296-445b00_D2
Tumor
0.3
ea6df59d-5240-4927-b19d-d44590_D2
Tumor
0.3
f6173181-0993-4a5f-a4cd-5f30b1_D2
Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
aa0f5b40-3290-4255-8f4d-f45d4e_D3
Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.1
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Normal
0.1
359f5c81-2575-497e-8630-e4866f_D2
Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
1bf00d93-240f-47e8-8055-f546b0_D2
Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
cd6a4013-2958-44b9-a4f1-45c9e4_D2
Tumor
0.0
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Normal
0.0
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Normal
0.0
92c1ebb5-ac1d-4bf5-a14f-516e1d_D3
Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
211cbcef-cb1f-4c80-a1c8-a76d3c_D2
Normal
-0.1
206f3bd9-f62c-4663-8fdb-5b731b_D2
Normal
-0.1
019cd0c0-733d-4b25-90e3-d54ce0_D2
Normal
-0.1
efee6bb9-69dd-46c2-85b3-b55962_D2
Normal
-0.1
9bf309bc-0fb6-4060-aba2-888eb3_D2
Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
1fbb1add-4660-4ec1-b8c2-360f9f_D2
Normal
-0.1
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Normal
-0.1
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Normal
-0.1
51590333-cfe5-4ce5-b8ff-58fa3c_D2
Normal
-0.1
c65afd57-530c-4366-b2c8-463a46_D2
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
0065bfd9-e1b9-43a8-9379-9658ba_D3
Tumor
-0.1
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Normal
-0.1
377cdd37-d1bd-4042-997e-478a0f_D2
Normal
-0.1
87b0e853-43ea-4efb-8a22-dd221f_D2
Normal
-0.1
2b810478-7956-4a8b-870d-184859_D2
Tumor
-0.1
0aef1fe8-ca61-4113-81d0-d82ee7_D2
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
16ac8458-5200-4302-9ad0-b311df_D2
Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
5da00abd-5fa7-4deb-95f1-7982e0_D3
Tumor
-0.2
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Normal
-0.2
41a04113-2061-4923-bca5-da586c_D2
Normal
-0.2
62627b73-1763-48bc-8eea-e5bd76_D2
Normal
-0.2
23e938d0-92b8-4aea-90c1-4385df_D2
Normal
-0.2
6b0a3188-d8ca-4d50-a377-a8fe4c_D2
Normal
-0.2
e070ff10-058b-4733-93ab-bdd702_D2
Normal
-0.2
e3c012aa-51c2-42b0-a478-bd620f_D2
Normal
-0.2
bed27f66-ef3b-4868-b4ad-205018_D2
Normal
-0.2
c307b7b0-534a-45fa-a420-35f773_D2
Normal
-0.2
58a92726-4d1f-4e44-8938-52b97d_D3
Tumor
-0.2
2d266d2d-4bb3-436c-a3e7-06acb2_D3
Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
6797a69d-2f74-44b9-8147-cd4fac_D2
Normal
-0.2
694e8df1-d9ee-473b-bec1-4f9237_D2
Normal
-0.2
da747cee-5026-4923-af63-ad9f81_D2
Normal
-0.2
7fd2eea8-bf99-4f97-8b9e-fb703f_D2
Normal
-0.2
cfb4831f-e9ee-4e11-80fb-958f6f_D2
Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
526c3664-5b9b-4a2b-a00e-a14623_D2
Tumor
-0.3
3765c09a-fff7-4b37-bf2b-452b23_D2
Normal
-0.3
799893aa-d523-4a08-9ea7-611cca_D3
Tumor
-0.3
1c070992-647b-4173-a481-904c4d_D2
Normal
-0.3
3a17283c-a0f4-4514-956b-080d11_D2
Normal
-0.3
01d1ffca-4235-4dfe-bf62-56f71d_D3
Tumor
-0.3
cbd0e774-c741-4753-9c9e-391a7d_D2
Normal
-0.3
9a6879b1-4f78-4ac6-9fca-dad049_D2
Normal
-0.3
963fc8db-f412-4427-a198-23f660_D2
Normal
-0.3
853ecf90-71e6-4156-a56f-a34b65_D2
Normal
-0.4
04ded2cd-3b57-4aec-9c11-48f58e_D2
Normal
-0.4
b871c0c1-a97b-4ac1-887c-0317b6_D2
Normal
-0.4
5a3aa99d-ca10-45f6-939f-12392a_D2
Normal
-0.8
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.