HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.8 nTPM
HPA Brain:42.2 nTPM
GTEx:15.8 nTPM
FANTOM5:77.6 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:44.4 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071813
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 35.3
1898 Male, age 80, left hemisphere 44.5
1855 Male, age 76, left hemisphere 39.0
2621 Female, age 67, right hemisphere 35.7
1911 Female, age 85, right hemisphere 32.8
2148 Female, age 91, left hemisphere 32.8
2529 Female, age 94, left hemisphere 26.7
Dentate gyrus
nTPM: 36.8
1927 Female, age 91, both hemispheres 50.2
2010 Male, age 76, both hemispheres 44.1
2246 Female, age 85, both hemispheres 33.5
2530 Female, age 94, left hemisphere 32.7
2531 Female, age 67, both hemispheres 32.1
2528 Male, age 74, both hemispheres 28.0
Entorhinal gyrus
nTPM: 31.2
1938 Female, age 85, left hemisphere 36.7
2764 Male, age 80, right hemisphere 35.2
2613 Female, age 94, left hemisphere 34.2
1787 Male, age 76, left hemisphere 30.3
2686 Male, age 75, right hemisphere 28.8
2117 Female, age 91, right hemisphere 21.8
Hippocampus, CA1
nTPM: 42.2
2749 Male, age 80, left hemisphere 64.0
2045 Male, age 76, both hemispheres 45.5
1873 Female, age 85, both hemispheres 42.8
2527 Male, age 74, both hemispheres 31.4
2082 Female, age 91, right hemisphere 27.3
Hippocampus, CA2
nTPM: 35.2
1892 Male, age 76, both hemispheres 54.3
1963 Male, age 80, left hemisphere 44.8
2249 Male, age 74, both hemispheres 29.6
1940 Female, age 85, left hemisphere 29.3
2437 Female, age 94, left hemisphere 27.1
2113 Female, age 91, right hemisphere 26.2
Hippocampus, CA3
nTPM: 40.2
2137 Male, age 80, left hemisphere 53.7
2620 Female, age 94, left hemisphere 46.5
1867 Male, age 76, both hemispheres 43.1
2861 Female, age 67, both hemispheres 33.1
2436 Male, age 74, both hemispheres 32.7
1891 Female, age 85, both hemispheres 32.4
Parahippocampal cortex
nTPM: 32.7
1850 Male, age 80, both hemispheres 41.5
1990 Female, age 91, right hemisphere 37.3
1933 Female, age 85, both hemispheres 35.8
2018 Male, age 76, both hemispheres 33.5
2532 Female, age 72, left hemisphere 33.1
2245 Female, age 91, both hemispheres 32.3
2250 Female, age 67, right hemisphere 31.6
2693 Female, age 94, both hemispheres 30.7
2692 Male, age 74, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.8
Perirhinal gyrus
nTPM: 40.1
1847 Female, age 91, left hemisphere 46.4
1841 Female, age 85, right hemisphere 41.4
1794 Male, age 80, right hemisphere 40.2
2521 Female, age 94, right hemisphere 36.3
2848 Male, age 76, right hemisphere 36.3
Subiculum
nTPM: 29.8
1977 Female, age 85, both hemispheres 35.2
1901 Male, age 80, both hemispheres 34.1
2042 Male, age 76, both hemispheres 31.9
2438 Female, age 94, left hemisphere 27.4
2619 Male, age 74, both hemispheres 25.4
2729 Female, age 91, right hemisphere 25.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.8
Samples: 197

Max nTPM: 49.9
Min nTPM: 3.9
Std nTPM: 7.9
Median nTPM: 13.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 37.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 34.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 34.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 33.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 33.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 33.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 32.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 77.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.6
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 51.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.3
Pig sample Sample description nTPM
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 17.0
Sample A Female 23.7
Sample B Female 17.0
Sample C Male 19.5
Sample D Male 17.4
Dorsal hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.6
Sample A Female 22.0
Sample B Female 24.0
Sample C Male 18.8
Sample D Male 18.6
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.4
Min nTPM: 19.6
Sample A Female 22.4
Sample B Female 21.7
Sample C Male 21.5
Sample D Male 19.6
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 18.0
Sample A Female 24.1
Sample B Female 18.0
Sample C Male 18.7
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 44.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.4
Samples: 4

Max nTPM: 46.2
Min nTPM: 41.3
Sample A Male 41.3
Sample B Male 46.2
Sample C Female 44.8
Sample D Female 45.2
Hippocampal formation
nTPM: 44.4
Samples: 4

Max nTPM: 47.7
Min nTPM: 41.6
Sample A Male 47.7
Sample B Male 45.6
Sample C Female 41.6
Sample D Female 42.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
68744606 Antisense, RP_050208_01_C03, Mouse strain C57BL/6J (56 days, male) 4.8

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