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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
161.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
151.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
145.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
136.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
133.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
127.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
123.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
121.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
117.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
117.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
115.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
113.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
109.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
109.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
108.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
107.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
104.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
101.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
99.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
98.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
97.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
93.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
92.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
92.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
91.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
89.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
89.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
89.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
88.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
83.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
79.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
78.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
77.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
76.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
76.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
76.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
76.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
75.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
71.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
71.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
70.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
70.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
69.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
68.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
68.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
67.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
67.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
66.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
66.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
65.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
59.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
58.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
56.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
55.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
51.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
51.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
48.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
47.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
46.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
38.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
37.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
35.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTF2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
181.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
151.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
138.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
135.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
131.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
123.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
123.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
122.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
121.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
121.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
120.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
120.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
119.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
117.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
117.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
116.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
116.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
115.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
115.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
115.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
115.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
115.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
114.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
114.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
114.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
113.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
113.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
113.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
112.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
112.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
112.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
112.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
112.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
112.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
112.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
111.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
111.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
111.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
110.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
110.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
110.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
110.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
110.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
109.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
109.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
109.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
109.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
108.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
108.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
107.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
107.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
106.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
106.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
106.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
106.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
106.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
106.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
106.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
106.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
105.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
105.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
105.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
104.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
104.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
104.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
104.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
104.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
104.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
104.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
104.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
103.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
103.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
103.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
103.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
103.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
103.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
103.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
102.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
102.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
102.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
102.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
102.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
102.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
102.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
102.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
102.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
102.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
101.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
101.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
101.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
101.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
101.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
101.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
101.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
101.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
101.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
101.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
101.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
101.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
100.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
100.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
100.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
100.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
100.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
100.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
100.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
100.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
100.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
100.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
100.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
99.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
99.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
99.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
99.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
99.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
99.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
98.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
98.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
98.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
98.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
98.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
98.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
98.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
98.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
98.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
98.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
98.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
98.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
98.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
98.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
98.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
98.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
97.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
97.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
97.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
97.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
97.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
97.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
97.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
97.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
97.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
97.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
97.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
97.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
96.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
96.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
96.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
96.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
96.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
96.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
96.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
96.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
96.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
96.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
96.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
96.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
96.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
96.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
95.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
95.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
95.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
95.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
95.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
95.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
95.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
95.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
95.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
95.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
95.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
94.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
94.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
94.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
94.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
94.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
94.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
94.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
94.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
94.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
94.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
94.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
94.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
94.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
93.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
93.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
93.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
93.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
93.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
93.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
93.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
92.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
92.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
92.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
92.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
92.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
91.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
91.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
91.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
91.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
91.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
91.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
91.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
91.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
91.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
91.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
91.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
91.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
90.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
90.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
90.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
90.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
90.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
89.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
89.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
89.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
89.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
89.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
89.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
89.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
89.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
89.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
89.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
89.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
89.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
89.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
89.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
88.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
88.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
88.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
88.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
88.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
88.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
88.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
88.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
88.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
88.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
88.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
88.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
88.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
88.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
88.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
88.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
88.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
88.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
87.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
87.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
87.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
87.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
87.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
87.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
87.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
87.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
87.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
87.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
87.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
87.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
87.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
87.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
86.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
86.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
86.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
86.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
86.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
86.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
86.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
86.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
85.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
85.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
85.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
85.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
85.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
85.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
85.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
85.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
85.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
85.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
85.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
85.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
84.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
84.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
84.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
84.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
84.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
84.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
84.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
84.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
84.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
84.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
83.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
83.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
83.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
83.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
83.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
83.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
83.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
83.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
82.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
82.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
82.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
82.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
82.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
82.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
82.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
82.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
82.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
82.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
81.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
81.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
81.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
81.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
81.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
81.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
81.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
80.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
80.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
80.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
80.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
80.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
80.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
80.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
80.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
80.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
79.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
79.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
79.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
79.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
78.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
78.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
78.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
78.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
78.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
78.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
78.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
78.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
78.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
77.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
77.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
77.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
76.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
76.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
76.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
76.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
76.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
76.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
76.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
76.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
75.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
75.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
75.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
75.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
75.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
75.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
75.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
75.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
75.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
75.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
74.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
74.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
74.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
74.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
74.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
74.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
73.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
73.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
73.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
73.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
73.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
73.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
73.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
73.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
73.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
73.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
72.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
72.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
72.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
71.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
71.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
71.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
71.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
71.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
71.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
71.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
70.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
70.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
70.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
70.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
70.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
69.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
69.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
69.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
68.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
68.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
68.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
68.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
68.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
67.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
67.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
67.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
67.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
67.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
67.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
66.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
66.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
66.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
66.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
66.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
66.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
66.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
65.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
65.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
65.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
65.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
65.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
65.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
65.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
64.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
64.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
64.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
64.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
64.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
63.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
63.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
63.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
63.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
62.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
62.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
62.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
62.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
62.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
62.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
62.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
61.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
61.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
61.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
61.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
61.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
61.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
60.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
60.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
60.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
59.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
59.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
59.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
59.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
59.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
59.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
58.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
58.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
57.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
57.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
57.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
57.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
56.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
55.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
55.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
55.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
55.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
54.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
54.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
54.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
54.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
53.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
53.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
51.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
51.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
51.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
50.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
50.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
50.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
49.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
49.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
49.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
48.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
47.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
47.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
47.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
47.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
47.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
47.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
46.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
46.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
46.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
46.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
45.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
45.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
45.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
44.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
43.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
42.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
42.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
41.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
41.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
40.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
39.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
39.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
38.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
38.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
38.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
36.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
36.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
35.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
35.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
33.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
31.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
29.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
27.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
23.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
158.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
155.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
140.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
128.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
126.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
126.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
121.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
117.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
110.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
110.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
109.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
108.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
105.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
105.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
105.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
105.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
104.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
101.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
101.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
100.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
100.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
100.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
100.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
99.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
99.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
98.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
98.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
97.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
97.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
96.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
96.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
96.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
96.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
94.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
93.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
93.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
93.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
93.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
92.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
92.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
92.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
92.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
92.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
91.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
91.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
91.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
89.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
89.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
89.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
89.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
88.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
88.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
88.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
87.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
86.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
86.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
86.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
85.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
85.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
84.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
84.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
83.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
83.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
83.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
83.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
82.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
82.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
81.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
81.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
80.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
80.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
79.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
79.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
79.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
79.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
78.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
78.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
77.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
77.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
77.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
76.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
76.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
74.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
73.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
72.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
72.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
69.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
68.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
67.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
65.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
64.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
60.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
59.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
57.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
57.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
55.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
48.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RTF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
80.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
262.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
203.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
188.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
188.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
187.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
158.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
156.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
153.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
142.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
141.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
141.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
139.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
139.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
138.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
138.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
136.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
132.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
130.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
129.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
129.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
128.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
126.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
124.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
123.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
121.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
120.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
119.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
118.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
118.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
117.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
117.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
116.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
116.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
116.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
114.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
114.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
112.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
111.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
111.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
110.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
110.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
109.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
109.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
108.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
108.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
107.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
105.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
104.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
104.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
102.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
102.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
102.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
101.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
101.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
100.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
100.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
99.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
99.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
98.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
98.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
98.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
98.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
98.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
97.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
97.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
97.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
96.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
96.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
96.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
95.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
95.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
94.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
94.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
94.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
94.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
94.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
93.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
92.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
92.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
92.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
92.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
91.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
90.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
90.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
90.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
90.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
90.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
90.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
89.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
89.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
89.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
89.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
89.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
88.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
87.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
86.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
86.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
86.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
86.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
85.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
84.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
84.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
83.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
83.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
83.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
83.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
82.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
82.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
82.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
82.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
82.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
82.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
82.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
81.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
81.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
81.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
81.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
81.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
80.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
80.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
80.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
79.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
79.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
79.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
79.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
79.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
78.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
78.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
78.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
78.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
78.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
78.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
77.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
77.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
76.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
76.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
76.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
76.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
75.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
75.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
75.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
75.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
74.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
74.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
74.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
74.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
73.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
73.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
73.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
73.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
72.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
72.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
72.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
72.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
71.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
71.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
71.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
71.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
70.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
70.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
70.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
70.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
69.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
69.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
69.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
69.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
69.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
69.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
69.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
69.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
69.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
68.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
68.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
68.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
68.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
68.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
68.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
67.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
67.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
66.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
66.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
66.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
65.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
65.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
65.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
65.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
64.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
64.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
64.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
64.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
64.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
64.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
63.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
63.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
63.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
63.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
63.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
62.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
62.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
62.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
62.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
61.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
60.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
60.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
59.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
59.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
59.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
59.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
59.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
58.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
58.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
58.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
58.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
57.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
57.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
57.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
57.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
56.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
56.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
56.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
56.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
56.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
55.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
55.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
55.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
55.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
54.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
54.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
54.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
53.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
52.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
52.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
52.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
52.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
51.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
50.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
50.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
48.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
47.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
47.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
47.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
46.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
46.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
46.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
45.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
45.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
45.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
44.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
44.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
44.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
43.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
43.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
42.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
41.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
41.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
39.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
39.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
37.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
35.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
33.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
31.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
26.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
24.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077110003
Tumor
0.8
CPT0012180003
Tumor
0.8
CPT0086950003
Tumor
0.8
CPT0006440003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0024670003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0025350003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0009060003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0012080003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0000660001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0012090003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088640003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0077320001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0014160003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0076350001
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0007860003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0069160003
Tumor
-0.5
CPT0069000003
Tumor
-0.5
CPT0069190001
Normal
-0.5
CPT0081880003
Tumor
-0.5
CPT0078510003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
