HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:137.9 nTPM
GTEx:14.5 nTPM
FANTOM5:185.1 Scaled Tags Per Million
Pig:58.9 nTPM
Mouse:49.3 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002727
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 137.9
Sample id Sample description nTPM
Hippocampus
nTPM: 87.2
1898 Male, age 80, left hemisphere 113.2
1855 Male, age 76, left hemisphere 106.9
2621 Female, age 67, right hemisphere 97.1
2148 Female, age 91, left hemisphere 96.2
1911 Female, age 85, right hemisphere 59.8
2529 Female, age 94, left hemisphere 50.0
Dentate gyrus
nTPM: 98.1
2531 Female, age 67, both hemispheres 116.8
2010 Male, age 76, both hemispheres 109.0
1927 Female, age 91, both hemispheres 104.2
2530 Female, age 94, left hemisphere 88.5
2246 Female, age 85, both hemispheres 87.5
2528 Male, age 74, both hemispheres 82.3
Entorhinal gyrus
nTPM: 109.6
2613 Female, age 94, left hemisphere 161.7
2764 Male, age 80, right hemisphere 112.9
1938 Female, age 85, left hemisphere 108.6
2686 Male, age 75, right hemisphere 105.4
1787 Male, age 76, left hemisphere 101.9
2117 Female, age 91, right hemisphere 67.1
Hippocampus, CA1
nTPM: 94.1
1873 Female, age 85, both hemispheres 125.8
2749 Male, age 80, left hemisphere 121.2
2045 Male, age 76, both hemispheres 104.8
2527 Male, age 74, both hemispheres 64.9
2082 Female, age 91, right hemisphere 53.9
Hippocampus, CA2
nTPM: 98.7
1963 Male, age 80, left hemisphere 134.9
1892 Male, age 76, both hemispheres 116.6
1940 Female, age 85, left hemisphere 105.7
2437 Female, age 94, left hemisphere 96.8
2113 Female, age 91, right hemisphere 70.6
2249 Male, age 74, both hemispheres 67.4
Hippocampus, CA3
nTPM: 83.4
2620 Female, age 94, left hemisphere 121.0
2861 Female, age 67, both hemispheres 98.9
1891 Female, age 85, both hemispheres 92.2
1867 Male, age 76, both hemispheres 82.9
2436 Male, age 74, both hemispheres 63.9
2137 Male, age 80, left hemisphere 41.8
Parahippocampal cortex
nTPM: 109.9
2693 Female, age 94, both hemispheres 137.5
2532 Female, age 72, left hemisphere 129.3
1990 Female, age 91, right hemisphere 121.2
2250 Female, age 67, right hemisphere 111.4
1933 Female, age 85, both hemispheres 109.6
1850 Male, age 80, both hemispheres 109.5
2622 Female, age 67, right hemisphere 107.2
2692 Male, age 74, both hemispheres 95.6
2245 Female, age 91, both hemispheres 94.1
2018 Male, age 76, both hemispheres 83.3
Perirhinal gyrus
nTPM: 137.9
2521 Female, age 94, right hemisphere 207.3
1847 Female, age 91, left hemisphere 136.6
1794 Male, age 80, right hemisphere 124.6
1841 Female, age 85, right hemisphere 120.7
2848 Male, age 76, right hemisphere 100.2
Subiculum
nTPM: 79.9
1977 Female, age 85, both hemispheres 99.6
2438 Female, age 94, left hemisphere 96.6
2619 Male, age 74, both hemispheres 89.9
2729 Female, age 91, right hemisphere 71.6
1901 Male, age 80, both hemispheres 68.2
2042 Male, age 76, both hemispheres 53.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 47.1
Min nTPM: 2.6
Std nTPM: 7.9
Median nTPM: 12.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 38.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 36.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 33.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 32.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 31.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 185.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.1
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 143.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 58.9
Pig sample Sample description nTPM
Subiculum
nTPM: 38.5
Samples: 4

Max nTPM: 49.7
Min nTPM: 31.0
Sample A Female 49.7
Sample B Female 34.2
Sample C Male 39.1
Sample D Male 31.0
Dorsal hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 37.8
Min nTPM: 26.9
Sample A Female 32.5
Sample B Female 28.8
Sample C Male 37.8
Sample D Male 26.9
Entorhinal cortex
nTPM: 59.0
Samples: 4

Max nTPM: 69.5
Min nTPM: 51.7
Sample A Female 61.7
Sample B Female 51.7
Sample C Male 52.9
Sample D Male 69.5
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 31.0
Min nTPM: 18.0
Sample A Female 31.0
Sample B Female 30.3
Sample C Male 28.4
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 49.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.3
Samples: 4

Max nTPM: 58.4
Min nTPM: 36.1
Sample A Male 49.7
Sample B Male 49.1
Sample C Female 36.1
Sample D Female 58.4
Hippocampal formation
nTPM: 49.3
Samples: 4

Max nTPM: 70.6
Min nTPM: 36.2
Sample A Male 36.4
Sample B Male 54.0
Sample C Female 70.6
Sample D Female 36.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
68844666 Antisense, RP_050222_02_B08, Mouse strain C57BL/6J (56 days, male) 14.0
71587783 Antisense, RP_050725_03_F07, Mouse strain C57BL/6J (56 days, male) 11.5
74000492 Antisense, RP_051219_02_C02, Mouse strain C57BL/6J (56 days, male) 9.8
75042240 Antisense, RP_051219_02_C02, Mouse strain C57BL/6J (56 days, male) 8.6

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