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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTBP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
259.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
236.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
222.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
214.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
188.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
181.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
175.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
166.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
149.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
142.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
135.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
134.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
126.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
120.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
115.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
104.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
102.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
100.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
96.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
92.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
92.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
89.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
85.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
84.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
84.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
83.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
83.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
80.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
78.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
78.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
77.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
74.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
72.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
72.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
71.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
70.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
70.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
69.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
68.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
68.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
68.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
68.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
67.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
66.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
66.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
64.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
64.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
63.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
60.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
60.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
59.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
56.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
54.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
53.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
51.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
51.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
47.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
46.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
46.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
42.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
41.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
36.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
85.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
168.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
161.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
159.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
156.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
155.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
154.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
154.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
151.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
147.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
146.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
145.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
144.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
143.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
141.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
139.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
138.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
137.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
135.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
135.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
134.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
133.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
129.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
128.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
127.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
126.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
125.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
124.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
124.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
124.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
124.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
122.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
122.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
122.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
122.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
122.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
122.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
122.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
122.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
121.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
121.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
121.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
121.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
121.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
120.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
120.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
120.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
118.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
118.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
117.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
117.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
116.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
116.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
116.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
116.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
114.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
114.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
114.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
114.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
113.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
113.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
112.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
111.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
111.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
111.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
111.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
110.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
110.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
110.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
110.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
110.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
109.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
109.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
109.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
109.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
109.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
109.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
109.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
108.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
108.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
108.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
108.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
107.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
107.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
107.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
107.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
107.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
107.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
107.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
106.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
106.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
106.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
106.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
106.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
106.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
105.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
105.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
105.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
105.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
105.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
105.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
104.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
104.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
104.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
104.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
104.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
104.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
104.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
103.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
103.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
103.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
103.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
103.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
103.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
103.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
103.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
103.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
102.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
102.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
102.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
102.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
101.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
101.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
101.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
100.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
100.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
99.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
99.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
99.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
99.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
99.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
99.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
98.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
98.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
98.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
98.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
98.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
98.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
97.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
97.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
97.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
97.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
96.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
96.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
96.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
96.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
96.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
96.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
96.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
96.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
96.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
96.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
95.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
95.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
95.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
95.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
95.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
95.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
95.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
95.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
95.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
95.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
95.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
95.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
95.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
94.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
94.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
94.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
94.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
94.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
94.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
94.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
94.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
94.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
94.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
94.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
94.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
94.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
94.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
93.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
93.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
93.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
93.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
93.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
93.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
93.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
93.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
92.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
92.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
91.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
91.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
91.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
91.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
91.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
91.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
91.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
91.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
91.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
91.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
91.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
91.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
90.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
90.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
90.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
90.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
90.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
90.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
90.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
90.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
90.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
90.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
90.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
90.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
90.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
90.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
89.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
89.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
89.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
89.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
89.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
89.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
89.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
89.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
89.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
89.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
89.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
89.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
89.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
88.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
88.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
88.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
88.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
88.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
88.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
88.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
88.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
88.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
88.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
88.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
87.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
87.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
87.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
87.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
87.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
87.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
86.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
86.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
86.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
86.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
86.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
86.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
86.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
86.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
86.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
86.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
86.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
86.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
85.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
85.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
85.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
85.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
85.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
85.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
85.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
84.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
84.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
84.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
84.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
84.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
84.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
84.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
84.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
84.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
84.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
83.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
83.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
83.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
83.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
83.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
83.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
82.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
82.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
82.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
82.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
82.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
82.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
82.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
82.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
82.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
81.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
81.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
81.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
81.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
81.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
80.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
80.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
80.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
80.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
80.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
80.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
80.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
79.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
79.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
79.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
79.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
79.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
79.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
79.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
79.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
79.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
78.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
78.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
78.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
78.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
78.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
78.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
78.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
78.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
78.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
78.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
78.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
77.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
77.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
77.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
77.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
77.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
77.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
77.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
77.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
76.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
76.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
76.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
76.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
76.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
75.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
75.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
75.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
75.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
75.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
75.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
75.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
75.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
74.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
74.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
74.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
74.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
74.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
74.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
74.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
73.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
73.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
73.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
73.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
73.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
73.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
73.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
73.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
73.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
73.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
73.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
73.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
73.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
73.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
72.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
72.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
72.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
72.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
72.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
72.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
72.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
72.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
72.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
72.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
72.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
72.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
71.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
71.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
71.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
71.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
71.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
71.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
71.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
70.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
70.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
70.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
70.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
70.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
70.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
70.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
69.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
69.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
69.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
69.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
68.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
68.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
68.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
68.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
68.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
68.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
68.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
67.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
67.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
67.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
67.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
67.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
67.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
67.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
67.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
66.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
66.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
65.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
65.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
65.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
64.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
64.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
64.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
64.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
64.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
64.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
64.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
64.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
64.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
64.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
64.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
64.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
64.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
63.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
63.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
63.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
63.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
62.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
62.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
62.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
62.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
62.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
62.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
61.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
61.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
61.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
60.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
60.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
60.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
60.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
60.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
59.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
59.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
59.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
59.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
59.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
59.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
58.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
58.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
57.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
57.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
57.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
57.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
57.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
57.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
57.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
56.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
56.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
56.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
56.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
55.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
55.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
54.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
54.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
53.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
53.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
52.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
52.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
52.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
52.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
52.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
52.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
52.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
51.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
51.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
51.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
50.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
50.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
49.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
49.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
48.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
48.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
48.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
48.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
47.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
46.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
46.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
44.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
44.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
42.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
42.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
41.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
41.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
37.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
37.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
36.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
35.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
31.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
31.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
140.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
137.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
123.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
121.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
121.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
120.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
118.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
117.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
116.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
113.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
113.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
110.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
110.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
110.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
109.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
109.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
107.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
106.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
105.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
105.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
104.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
104.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
103.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
103.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
103.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
102.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
102.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
101.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
100.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
99.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
99.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
98.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
98.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
96.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
96.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
95.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
95.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
95.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
95.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
95.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
95.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
95.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
94.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
94.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
94.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
94.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
93.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
93.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
92.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
92.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
91.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
89.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
89.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
89.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
89.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
88.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
88.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
88.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
87.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
87.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
86.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
85.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
85.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
85.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
85.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
85.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
84.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
83.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
83.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
83.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
83.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
82.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
82.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
82.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
82.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
81.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
81.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
80.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
79.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
77.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
77.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
76.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
76.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
76.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
76.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
74.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
73.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
73.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
71.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
70.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
70.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
68.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
65.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
49.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
48.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
46.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTBP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
107.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
303.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
277.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
264.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
241.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
220.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
220.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
220.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
219.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
215.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
205.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
181.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
180.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
177.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
173.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
168.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
168.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
167.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
167.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
167.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
166.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
164.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
163.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
163.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
163.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
162.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
160.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
156.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
155.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
154.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
154.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
153.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
152.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
152.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
151.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
149.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
149.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
148.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
148.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
148.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
148.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
146.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
146.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
144.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
144.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
142.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
141.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
138.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
138.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
136.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
136.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
136.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
135.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
133.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
133.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
133.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
132.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
132.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
132.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
131.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
131.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
131.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
130.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
130.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
130.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
130.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
129.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
129.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
128.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
127.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
127.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
127.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
127.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
126.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
125.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
124.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
124.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
122.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
122.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
122.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
121.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
121.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
120.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
120.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
120.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
119.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
119.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
119.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
119.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
118.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
117.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
117.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
116.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
116.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
116.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
115.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
115.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
114.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
113.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
113.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
113.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
113.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
112.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
111.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
111.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
111.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
111.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
111.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
111.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
111.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
110.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
110.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
109.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
109.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
109.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
109.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
109.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
109.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
108.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
108.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
108.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
107.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
107.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
107.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
107.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
107.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
106.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
106.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
105.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
105.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
105.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
105.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
105.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
105.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
105.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
104.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
104.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
104.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
104.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
104.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
103.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
103.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
103.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
103.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
103.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
102.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
101.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
101.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
101.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
101.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
100.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
100.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
100.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
98.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
98.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
98.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
98.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
97.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
97.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
97.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
97.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
96.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
96.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
96.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
96.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
95.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
95.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
94.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
94.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
94.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
93.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
93.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
93.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
92.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
92.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
92.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
92.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
92.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
91.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
90.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
90.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
90.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
90.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
89.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
89.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
89.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
88.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
88.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
88.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
87.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
87.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
87.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
86.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
86.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
86.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
86.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
85.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
85.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
85.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
85.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
83.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
83.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
83.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
82.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
82.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
82.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
81.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
81.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
81.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
80.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
80.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
79.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
79.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
79.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
78.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
78.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
78.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
78.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
78.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
77.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
77.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
77.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
77.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
76.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
76.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
75.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
75.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
74.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
74.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
74.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
74.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
74.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
74.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
74.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
73.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
73.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
72.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
72.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
72.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
71.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
71.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
70.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
69.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
69.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
69.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
68.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
68.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
67.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
65.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
65.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
64.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
63.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
63.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
63.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
62.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
62.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
62.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
61.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
60.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
59.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
59.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
59.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
56.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
56.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
56.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
56.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
55.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
55.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
55.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
55.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
54.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
53.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
52.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
50.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
49.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
46.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
42.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
42.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
42.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
0.7
CPT0066470004
Tumor
0.6
CPT0077310003
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0075560003
Tumor
0.5
CPT0014160003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0065690003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0012900004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0079180003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0025920001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0092160003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0002370001
Normal
N/A
CPT0092740003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0084560003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0001510001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0088550004
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0078660003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.