HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:37.8 nTPM
HPA Brain:90.4 nTPM
GTEx:37.8 nTPM
FANTOM5:169.9 Scaled Tags Per Million
Pig:92.1 nTPM
Mouse:281.7 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002815Antibody HPA003525Antibody CAB033782
Glial cells MediumHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.4
Sample id Sample description nTPM
Hippocampus
nTPM: 74.8
1898 Male, age 80, left hemisphere 107.4
2621 Female, age 67, right hemisphere 78.3
2529 Female, age 94, left hemisphere 69.3
2148 Female, age 91, left hemisphere 66.2
1855 Male, age 76, left hemisphere 65.4
1911 Female, age 85, right hemisphere 62.1
Dentate gyrus
nTPM: 72.6
2530 Female, age 94, left hemisphere 81.5
1927 Female, age 91, both hemispheres 79.8
2528 Male, age 74, both hemispheres 79.8
2010 Male, age 76, both hemispheres 74.9
2246 Female, age 85, both hemispheres 63.9
2531 Female, age 67, both hemispheres 55.5
Entorhinal gyrus
nTPM: 78.8
2764 Male, age 80, right hemisphere 104.4
1938 Female, age 85, left hemisphere 81.6
2613 Female, age 94, left hemisphere 77.7
1787 Male, age 76, left hemisphere 77.3
2117 Female, age 91, right hemisphere 76.7
2686 Male, age 75, right hemisphere 55.0
Hippocampus, CA1
nTPM: 82.0
2749 Male, age 80, left hemisphere 123.5
2527 Male, age 74, both hemispheres 86.5
1873 Female, age 85, both hemispheres 75.3
2082 Female, age 91, right hemisphere 68.0
2045 Male, age 76, both hemispheres 56.9
Hippocampus, CA2
nTPM: 84.8
2249 Male, age 74, both hemispheres 105.7
1963 Male, age 80, left hemisphere 93.8
1892 Male, age 76, both hemispheres 90.0
2437 Female, age 94, left hemisphere 80.4
1940 Female, age 85, left hemisphere 71.3
2113 Female, age 91, right hemisphere 67.5
Hippocampus, CA3
nTPM: 80.1
2436 Male, age 74, both hemispheres 125.2
2137 Male, age 80, left hemisphere 87.1
1867 Male, age 76, both hemispheres 79.8
1891 Female, age 85, both hemispheres 68.8
2620 Female, age 94, left hemisphere 63.1
2861 Female, age 67, both hemispheres 56.9
Parahippocampal cortex
nTPM: 75.5
1990 Female, age 91, right hemisphere 90.7
1850 Male, age 80, both hemispheres 89.4
2250 Female, age 67, right hemisphere 87.2
2245 Female, age 91, both hemispheres 81.5
1933 Female, age 85, both hemispheres 81.1
2532 Female, age 72, left hemisphere 69.7
2692 Male, age 74, both hemispheres 66.2
2693 Female, age 94, both hemispheres 64.4
2622 Female, age 67, right hemisphere 63.8
2018 Male, age 76, both hemispheres 61.3
Perirhinal gyrus
nTPM: 90.4
1847 Female, age 91, left hemisphere 117.1
1794 Male, age 80, right hemisphere 105.4
1841 Female, age 85, right hemisphere 83.3
2521 Female, age 94, right hemisphere 79.6
2848 Male, age 76, right hemisphere 66.7
Subiculum
nTPM: 77.3
1901 Male, age 80, both hemispheres 86.1
1977 Female, age 85, both hemispheres 85.9
2619 Male, age 74, both hemispheres 84.0
2438 Female, age 94, left hemisphere 81.2
2729 Female, age 91, right hemisphere 67.3
2042 Male, age 76, both hemispheres 59.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 37.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.8
Samples: 197

Max nTPM: 73.1
Min nTPM: 10.7
Std nTPM: 13.1
Median nTPM: 36.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 73.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 71.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 69.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 68.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 66.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 65.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 62.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 60.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 169.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.9
FF:10169-103B7 60 years, female 223.2
FF:10153-102I9 76 years, female 116.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 92.1
Pig sample Sample description nTPM
Subiculum
nTPM: 77.6
Samples: 4

Max nTPM: 102.1
Min nTPM: 65.7
Sample A Female 102.1
Sample B Female 70.7
Sample C Male 71.7
Sample D Male 65.7
Dorsal hippocampus
nTPM: 92.1
Samples: 4

Max nTPM: 119.3
Min nTPM: 65.1
Sample A Female 119.3
Sample B Female 88.9
Sample C Male 94.9
Sample D Male 65.1
Entorhinal cortex
nTPM: 81.4
Samples: 4

Max nTPM: 97.2
Min nTPM: 65.7
Sample A Female 80.4
Sample B Female 97.2
Sample C Male 82.4
Sample D Male 65.7
Ventral hippocampus
nTPM: 87.9
Samples: 4

Max nTPM: 106.9
Min nTPM: 62.0
Sample A Female 99.8
Sample B Female 62.0
Sample C Male 106.9
Sample D Male 83.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 281.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 270.2
Samples: 4

Max nTPM: 280.5
Min nTPM: 265.0
Sample A Male 265.1
Sample B Male 280.5
Sample C Female 270.0
Sample D Female 265.0
Hippocampal formation
nTPM: 281.7
Samples: 4

Max nTPM: 295.2
Min nTPM: 265.0
Sample A Male 294.9
Sample B Male 271.5
Sample C Female 265.0
Sample D Female 295.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
68744540 Antisense, RP_050208_01_B03, Mouse strain C57BL/6J (56 days, male) 16.0

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