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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
73.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
184.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
162.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
161.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
157.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
145.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
143.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
134.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
131.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
126.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
126.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
126.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
121.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
117.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
114.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
106.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
103.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
102.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
93.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
89.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
87.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
86.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
86.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
85.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
81.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
78.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
78.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
74.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
74.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
69.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
69.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
68.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
64.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
63.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
63.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
61.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
61.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
57.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
57.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
54.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
54.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
54.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
53.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
51.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
49.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
49.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
46.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
41.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
41.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
35.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
33.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
28.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
26.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
23.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
141.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
70.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
58.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
57.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
48.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
45.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
43.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
41.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
37.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
36.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
35.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
32.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
32.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
26.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
26.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
24.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
22.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
22.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
22.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
22.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
21.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
20.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
20.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
20.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
20.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
17.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
13.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
12.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
12.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
32.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
30.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
27.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
27.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
27.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
22.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
19.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
6.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
6.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ST3GAL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
66.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
54.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
48.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
44.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
25.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
25.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
22.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
16.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
15.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
14.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
14.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
13.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
12.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
11.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
10.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
10.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
9.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
9.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
9.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
8.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
8.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
7.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
7.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
6.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
6.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
5.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
5.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
5.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
4.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
4.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
4.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
4.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
3.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.9
CPT0076330003
Tumor
1.4
CPT0078660003
Tumor
1.3
CPT0079180003
Tumor
1.0
CPT0026420001
Normal
0.8
CPT0001340003
Tumor
0.7
CPT0015730003
Tumor
0.7
CPT0017450001
Normal
0.6
CPT0023350003
Tumor
0.6
CPT0013790003
Normal
0.5
CPT0088480003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0078530001
Normal
0.5
CPT0063630003
Tumor
0.5
CPT0020120003
Tumor
0.4
CPT0078840001
Normal
0.4
CPT0077310003
Tumor
0.4
CPT0018250001
Normal
0.4
CPT0025050003
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0081880003
Tumor
0.4
CPT0006530001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0065430003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0065450001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0012550003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0086890003
Normal
0.2
CPT0092740003
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0012570003
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0075720003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0078670001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0086030003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0000890001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0025880003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0079270003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0025170003
Tumor
-0.4
CPT0069190001
Normal
-0.4
CPT0001500009
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0064400001
Normal
-0.4
CPT0077110003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0009000003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0063330001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0065930003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0078510003
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0009020003
Normal
-0.5
CPT0019130003
Tumor
-0.5
CPT0012080003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0079300001
Normal
-0.5
CPT0006630003
Tumor
-0.5
CPT0078830003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0025290003
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0092190003
Normal
-0.8
CPT0000870016
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0086950003
Tumor
-0.8
CPT0017410003
Tumor
-0.9
CPT0006900003
Tumor
-0.9
CPT0014160003
Tumor
-1.0
CPT0011410003
Tumor
-1.0
CPT0078930003
Tumor
-1.0
CPT0012900004
Tumor
-1.1
CPT0019990003
Tumor
-1.1
CPT0075560003
Tumor
-1.2
CPT0023690003
Tumor
-1.2
CPT0066470004
Tumor
-1.3
CPT0021240003
Tumor
-1.6
CPT0009060003
Tumor
-1.6
CPT0092290003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
