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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NFIX is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
69.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
59.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
52.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
49.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
37.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
27.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
26.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
6.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NFIX is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
80.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
79.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
73.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
63.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
61.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
60.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
58.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
58.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
56.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
56.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
54.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
54.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
53.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
53.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
51.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
50.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
50.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
50.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
50.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
49.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
49.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
48.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
48.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
47.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
46.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
46.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
46.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
45.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
45.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
45.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
44.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
44.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
44.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
42.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
42.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
42.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
42.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
40.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
40.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
40.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
38.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
38.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
37.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
37.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
37.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
37.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
37.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
36.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
36.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
36.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
35.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
35.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
35.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
35.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
35.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
35.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
35.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
35.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
35.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
34.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
34.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
33.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
33.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
33.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
33.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
32.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
32.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
32.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
31.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
30.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
30.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
29.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
28.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
28.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
28.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
27.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
27.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
25.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
24.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
24.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
24.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
24.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
23.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
23.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
21.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
21.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
19.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
17.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
16.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
13.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NFIX is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
94.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
92.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
70.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
66.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
65.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
61.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
60.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
53.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
52.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
47.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
37.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
37.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
37.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
31.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
31.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
27.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
26.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
25.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
22.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
22.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
20.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
19.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
15.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
7.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NFIX is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
93.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
66.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
55.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
53.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
50.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
49.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
41.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
41.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
39.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
30.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
29.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
28.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
17.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
14.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
13.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
11.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
10.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
10.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
9.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
8.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
8.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
7.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
7.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
6.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
5.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
5.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
5.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
5.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
4.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
4.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
4.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
3.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
3.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
2.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
2.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
1.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0085670003
Tumor
1.1
CPT0026410003
Tumor
1.0
CPT0086870003
Tumor
0.9
CPT0014370004
Tumor
0.8
CPT0006440003
Tumor
0.8
CPT0014450004
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0088630003
Tumor
0.8
CPT0011240003
Tumor
0.8
CPT0006900003
Tumor
0.7
CPT0081990003
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0077110003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0077320001
Normal
0.5
CPT0001260009
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0079230003
Tumor
0.5
CPT0010120001
Normal
0.5
CPT0009000003
Tumor
0.5
CPT0025580004
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0075720003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0075130003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0025880003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0019130003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0012920003
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0071150004
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0026420001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0013790003
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0000640003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0089020003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0006950001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0012770003
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0025050003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0066470004
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0088970003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0086030003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0081880003
Tumor
-0.9
CPT0012550003
Tumor
-0.9
CPT0079180003
Tumor
-1.0
CPT0012180003
Tumor
-1.0
CPT0092290003
Tumor
-1.1
CPT0065750003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
