HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.1 nTPM
HPA Brain:46.6 nTPM
GTEx:15.1 nTPM
FANTOM5:13.0 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:69.1 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014753
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 46.6
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
1898 Male, age 80, left hemisphere 46.8
2621 Female, age 67, right hemisphere 37.5
1855 Male, age 76, left hemisphere 35.9
2148 Female, age 91, left hemisphere 32.7
2529 Female, age 94, left hemisphere 26.0
1911 Female, age 85, right hemisphere 20.8
Dentate gyrus
nTPM: 36.0
2530 Female, age 94, left hemisphere 42.5
1927 Female, age 91, both hemispheres 38.6
2010 Male, age 76, both hemispheres 37.9
2246 Female, age 85, both hemispheres 35.0
2531 Female, age 67, both hemispheres 31.9
2528 Male, age 74, both hemispheres 30.1
Entorhinal gyrus
nTPM: 41.9
2613 Female, age 94, left hemisphere 53.8
2764 Male, age 80, right hemisphere 49.7
1787 Male, age 76, left hemisphere 43.0
1938 Female, age 85, left hemisphere 39.4
2686 Male, age 75, right hemisphere 37.7
2117 Female, age 91, right hemisphere 27.7
Hippocampus, CA1
nTPM: 34.6
2749 Male, age 80, left hemisphere 41.8
2082 Female, age 91, right hemisphere 38.7
1873 Female, age 85, both hemispheres 34.7
2527 Male, age 74, both hemispheres 29.4
2045 Male, age 76, both hemispheres 28.2
Hippocampus, CA2
nTPM: 38.5
2437 Female, age 94, left hemisphere 49.4
1892 Male, age 76, both hemispheres 49.0
1963 Male, age 80, left hemisphere 42.7
2249 Male, age 74, both hemispheres 35.3
2113 Female, age 91, right hemisphere 28.2
1940 Female, age 85, left hemisphere 26.2
Hippocampus, CA3
nTPM: 37.9
2436 Male, age 74, both hemispheres 67.0
2861 Female, age 67, both hemispheres 42.3
1867 Male, age 76, both hemispheres 31.9
2620 Female, age 94, left hemisphere 30.9
2137 Male, age 80, left hemisphere 29.6
1891 Female, age 85, both hemispheres 25.8
Parahippocampal cortex
nTPM: 38.5
1933 Female, age 85, both hemispheres 45.2
2622 Female, age 67, right hemisphere 44.1
2693 Female, age 94, both hemispheres 43.3
1850 Male, age 80, both hemispheres 41.6
1990 Female, age 91, right hemisphere 38.6
2250 Female, age 67, right hemisphere 38.4
2245 Female, age 91, both hemispheres 36.3
2692 Male, age 74, both hemispheres 35.8
2532 Female, age 72, left hemisphere 33.2
2018 Male, age 76, both hemispheres 28.2
Perirhinal gyrus
nTPM: 46.6
1847 Female, age 91, left hemisphere 53.8
1794 Male, age 80, right hemisphere 47.1
1841 Female, age 85, right hemisphere 44.3
2848 Male, age 76, right hemisphere 44.1
2521 Female, age 94, right hemisphere 43.6
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 41.0
2438 Female, age 94, left hemisphere 39.4
2619 Male, age 74, both hemispheres 34.2
2729 Female, age 91, right hemisphere 29.4
1901 Male, age 80, both hemispheres 26.9
2042 Male, age 76, both hemispheres 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.1
Samples: 197

Max nTPM: 41.1
Min nTPM: 2.5
Std nTPM: 8.1
Median nTPM: 13.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 39.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 34.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 33.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 32.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 31.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 31.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.0
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 8.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 29.0
Min nTPM: 17.0
Sample A Female 29.0
Sample B Female 20.7
Sample C Male 21.0
Sample D Male 17.0
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 24.4
Min nTPM: 13.3
Sample A Female 24.4
Sample B Female 22.0
Sample C Male 17.0
Sample D Male 13.3
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.3
Sample A Female 11.2
Sample B Female 11.7
Sample C Male 13.5
Sample D Male 10.3
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.3
Sample A Female 15.1
Sample B Female 12.3
Sample C Male 21.1
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 69.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.1
Samples: 4

Max nTPM: 90.3
Min nTPM: 58.6
Sample A Male 58.6
Sample B Male 63.4
Sample C Female 64.1
Sample D Female 90.3
Hippocampal formation
nTPM: 44.8
Samples: 4

Max nTPM: 54.0
Min nTPM: 40.1
Sample A Male 41.9
Sample B Male 40.1
Sample C Female 43.3
Sample D Female 54.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
392934 Antisense, RP_040804_02_A05, Mouse strain C57BL/6J (56 days, male) 4.2
71020402 Antisense, RP_050725_01_B01, Mouse strain C57BL/6J (56 days, male) 2.1

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