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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYPL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
243.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
196.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
191.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
186.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
165.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
161.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
145.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
144.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
141.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
139.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
138.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
137.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
136.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
135.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
135.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
132.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
130.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
124.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
124.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
119.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
116.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
110.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
109.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
109.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
106.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
106.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
105.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
104.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
102.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
101.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
97.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
96.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
94.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
93.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
93.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
91.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
88.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
85.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
85.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
84.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
84.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
84.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
82.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
77.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
74.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
72.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
72.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
70.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
67.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
66.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
62.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
62.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
59.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
58.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
56.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
56.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
52.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
51.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
49.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
48.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
44.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYPL1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
356.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
344.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
206.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
189.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
187.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
178.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
171.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
170.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
168.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
166.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
165.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
163.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
162.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
162.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
162.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
161.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
160.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
157.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
156.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
156.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
155.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
155.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
154.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
154.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
153.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
152.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
152.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
152.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
151.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
150.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
148.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
148.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
148.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
147.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
146.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
146.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
145.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
144.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
143.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
143.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
142.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
142.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
142.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
141.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
141.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
140.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
139.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
137.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
137.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
137.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
136.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
136.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
136.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
136.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
135.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
135.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
135.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
134.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
134.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
134.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
133.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
133.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
133.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
133.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
132.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
131.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
131.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
130.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
130.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
130.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
130.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
130.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
130.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
129.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
128.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
128.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
128.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
127.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
127.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
127.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
127.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
126.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
126.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
126.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
125.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
125.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
125.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
124.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
124.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
124.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
124.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
123.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
123.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
123.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
123.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
123.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
122.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
122.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
121.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
121.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
121.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
121.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
121.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
121.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
121.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
120.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
120.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
120.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
120.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
119.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
119.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
119.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
119.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
118.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
118.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
118.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
118.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
118.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
118.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
118.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
117.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
117.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
117.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
117.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
116.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
116.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
116.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
116.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
115.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
115.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
115.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
115.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
115.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
115.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
115.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
115.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
115.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
115.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
114.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
114.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
114.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
113.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
113.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
113.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
113.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
113.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
113.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
113.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
113.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
112.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
112.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
112.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
112.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
112.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
111.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
111.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
111.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
111.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
111.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
111.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
111.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
110.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
110.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
110.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
110.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
110.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
109.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
109.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
109.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
109.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
108.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
108.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
108.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
108.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
108.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
108.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
107.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
107.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
107.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
107.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
106.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
106.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
106.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
106.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
106.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
106.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
106.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
106.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
106.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
105.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
105.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
105.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
105.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
104.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
104.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
104.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
103.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
103.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
103.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
103.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
103.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
103.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
103.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
103.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
103.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
102.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
102.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
102.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
102.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
102.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
102.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
102.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
101.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
101.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
100.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
100.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
100.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
100.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
100.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
99.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
99.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
98.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
98.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
98.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
98.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
97.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
97.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
97.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
97.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
97.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
96.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
96.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
96.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
95.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
95.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
94.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
94.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
94.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
94.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
94.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
94.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
93.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
93.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
93.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
93.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
93.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
93.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
92.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
92.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
91.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
91.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
91.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
91.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
90.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
90.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
90.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
90.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
90.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
90.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
90.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
89.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
89.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
89.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
89.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
89.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
89.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
88.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
88.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
88.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
88.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
88.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
88.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
87.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
87.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
87.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
87.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
87.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
86.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
86.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
86.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
86.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
86.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
86.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
86.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
85.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
85.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
85.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
85.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
85.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
85.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
85.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
84.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
83.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
83.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
83.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
83.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
83.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
83.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
83.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
83.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
82.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
82.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
82.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
82.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
82.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
82.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
82.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
82.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
82.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
82.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
81.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
81.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
81.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
81.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
81.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
81.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
81.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
80.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
80.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
80.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
80.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
80.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
80.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
80.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
79.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
79.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
79.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
79.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
79.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
79.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
78.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
78.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
78.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
78.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
78.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
77.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
77.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
77.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
76.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
76.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
76.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
76.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
76.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
76.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
75.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
75.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
75.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
75.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
75.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
75.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
74.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
74.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
73.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
73.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
73.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
73.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
73.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
73.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
73.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
72.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
72.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
72.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
71.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
71.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
71.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
70.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
70.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
69.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
69.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
68.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
68.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
68.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
68.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
68.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
68.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
67.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
67.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
67.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
67.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
66.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
66.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
66.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
66.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
66.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
66.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
66.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
65.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
65.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
65.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
65.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
64.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
64.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
64.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
64.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
64.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
63.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
63.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
63.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
62.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
62.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
62.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
61.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
61.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
61.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
60.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
60.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
60.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
59.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
59.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
59.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
59.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
59.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
59.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
58.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
58.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
57.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
55.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
55.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
55.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
54.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
54.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
54.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
53.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
53.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
53.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
53.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
53.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
52.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
52.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
51.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
50.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
50.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
50.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
50.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
49.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
49.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
49.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
49.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
49.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
48.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
48.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
47.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
47.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
47.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
46.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
46.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
46.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
45.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
45.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
44.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
43.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
43.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
43.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
43.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
42.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
42.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
41.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
41.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
41.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
41.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
40.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
40.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
38.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
38.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
38.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
37.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
37.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
36.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
35.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
34.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
32.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
32.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
31.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
31.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
24.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
23.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
23.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYPL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
111.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
234.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
234.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
232.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
178.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
176.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
176.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
168.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
164.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
158.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
156.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
156.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
155.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
154.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
148.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
142.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
142.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
142.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
140.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
139.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
139.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
139.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
138.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
135.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
134.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
133.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
133.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
132.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
131.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
129.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
126.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
125.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
125.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
125.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
124.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
122.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
121.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
120.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
119.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
119.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
117.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
117.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
117.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
114.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
112.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
111.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
110.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
109.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
108.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
108.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
108.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
107.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
105.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
104.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
103.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
102.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
102.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
102.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
102.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
101.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
100.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
99.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
99.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
98.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
98.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
97.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
96.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
95.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
92.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
91.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
90.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
88.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
88.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
87.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
87.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
85.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
84.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
84.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
82.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
82.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
81.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
80.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
80.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
79.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
78.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
75.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
74.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
73.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
72.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
72.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
71.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
70.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
64.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
64.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
62.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
55.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
54.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
52.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
44.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYPL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
436.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
364.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
297.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
260.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
197.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
193.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
182.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
173.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
172.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
169.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
163.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
163.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
159.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
158.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
157.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
151.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
149.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
148.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
147.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
146.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
143.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
143.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
142.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
142.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
142.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
139.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
139.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
138.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
136.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
135.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
133.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
133.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
132.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
132.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
130.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
129.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
126.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
126.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
126.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
126.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
124.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
121.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
121.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
119.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
118.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
117.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
116.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
115.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
115.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
115.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
115.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
114.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
113.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
113.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
113.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
112.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
110.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
110.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
109.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
108.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
108.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
108.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
108.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
108.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
107.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
105.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
105.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
105.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
105.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
105.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
104.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
104.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
102.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
102.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
102.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
101.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
101.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
100.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
100.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
99.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
98.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
98.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
96.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
96.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
96.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
95.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
95.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
95.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
95.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
94.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
94.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
94.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
94.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
93.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
93.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
93.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
92.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
92.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
92.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
92.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
92.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
91.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
91.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
91.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
90.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
90.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
90.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
90.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
89.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
89.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
88.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
88.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
88.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
88.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
88.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
87.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
87.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
87.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
86.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
86.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
85.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
85.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
85.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
85.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
84.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
84.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
84.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
84.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
84.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
84.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
83.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
82.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
81.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
81.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
80.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
80.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
80.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
80.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
80.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
79.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
78.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
78.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
78.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
78.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
77.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
76.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
75.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
75.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
74.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
74.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
72.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
70.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
70.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
70.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
70.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
70.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
69.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
68.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
68.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
68.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
67.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
67.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
67.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
66.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
66.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
66.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
66.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
65.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
65.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
65.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
64.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
64.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
64.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
63.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
63.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
62.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
62.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
62.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
61.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
60.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
60.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
60.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
60.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
59.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
59.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
59.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
59.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
59.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
59.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
59.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
59.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
58.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
57.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
57.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
57.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
56.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
55.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
55.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
55.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
54.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
54.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
54.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
54.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
54.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
53.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
53.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
53.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
52.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
52.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
51.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
51.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
50.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
50.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
50.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
49.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
49.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
48.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
48.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
48.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
48.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
48.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
46.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
46.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
46.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
46.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
45.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
45.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
44.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
44.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
42.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
42.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
42.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
41.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
39.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
38.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
38.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
37.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
37.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
36.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
36.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
35.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
35.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
32.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
32.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
31.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
30.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
30.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
29.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
28.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
1.0
CPT0079180003
Tumor
0.9
CPT0086950003
Tumor
0.7
CPT0025110003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0002350011
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0077310003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0065450001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0012900004
Tumor
0.3
CPT0082010001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0092310003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0001190001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0069010001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0088920001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0012280003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0025920001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0012770003
Normal
0.2
CPT0086890003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0063630003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0025610001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0064400001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0086030003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0015730003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0010110003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0009060003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0012180003
Tumor
-0.6
CPT0084560003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0088550004
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.