HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:7.9 nTPM
HPA Brain:18.7 nTPM
GTEx:7.9 nTPM
FANTOM5:7.2 Scaled Tags Per Million
Pig:2.2 nTPM
Mouse:0.0 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027398Antibody HPA027492Antibody HPA028033Antibody CAB013690
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells LowLowNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
1855 Male, age 76, left hemisphere 23.9
1898 Male, age 80, left hemisphere 21.3
2148 Female, age 91, left hemisphere 20.5
2529 Female, age 94, left hemisphere 19.3
1911 Female, age 85, right hemisphere 17.0
2621 Female, age 67, right hemisphere 10.1
Dentate gyrus
nTPM: 16.1
2528 Male, age 74, both hemispheres 30.6
2010 Male, age 76, both hemispheres 14.0
2530 Female, age 94, left hemisphere 14.0
2531 Female, age 67, both hemispheres 13.8
2246 Female, age 85, both hemispheres 13.4
1927 Female, age 91, both hemispheres 10.7
Entorhinal gyrus
nTPM: 5.5
2117 Female, age 91, right hemisphere 13.0
2764 Male, age 80, right hemisphere 6.0
1787 Male, age 76, left hemisphere 4.4
1938 Female, age 85, left hemisphere 3.7
2613 Female, age 94, left hemisphere 3.5
2686 Male, age 75, right hemisphere 2.7
Hippocampus, CA1
nTPM: 13.8
1873 Female, age 85, both hemispheres 22.7
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 14.4
2082 Female, age 91, right hemisphere 8.6
2749 Male, age 80, left hemisphere 5.6
Hippocampus, CA2
nTPM: 11.7
1963 Male, age 80, left hemisphere 20.1
2249 Male, age 74, both hemispheres 14.8
2113 Female, age 91, right hemisphere 12.5
1892 Male, age 76, both hemispheres 9.5
2437 Female, age 94, left hemisphere 8.4
1940 Female, age 85, left hemisphere 4.8
Hippocampus, CA3
nTPM: 14.5
2620 Female, age 94, left hemisphere 22.8
1891 Female, age 85, both hemispheres 18.1
2861 Female, age 67, both hemispheres 13.2
2436 Male, age 74, both hemispheres 12.2
1867 Male, age 76, both hemispheres 11.5
2137 Male, age 80, left hemisphere 9.0
Parahippocampal cortex
nTPM: 5.1
2018 Male, age 76, both hemispheres 12.3
2245 Female, age 91, both hemispheres 7.2
2692 Male, age 74, both hemispheres 7.0
1990 Female, age 91, right hemisphere 5.1
2532 Female, age 72, left hemisphere 4.6
1850 Male, age 80, both hemispheres 4.4
2250 Female, age 67, right hemisphere 3.0
2693 Female, age 94, both hemispheres 3.0
1933 Female, age 85, both hemispheres 2.7
2622 Female, age 67, right hemisphere 1.8
Perirhinal gyrus
nTPM: 2.8
1794 Male, age 80, right hemisphere 4.3
2521 Female, age 94, right hemisphere 3.1
2848 Male, age 76, right hemisphere 2.5
1841 Female, age 85, right hemisphere 2.1
1847 Female, age 91, left hemisphere 2.1
Subiculum
nTPM: 10.1
2729 Female, age 91, right hemisphere 20.4
2042 Male, age 76, both hemispheres 12.5
1901 Male, age 80, both hemispheres 9.9
2619 Male, age 74, both hemispheres 9.1
1977 Female, age 85, both hemispheres 4.8
2438 Female, age 94, left hemisphere 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.9
Samples: 197

Max nTPM: 31.2
Min nTPM: 0.1
Std nTPM: 5.0
Median nTPM: 6.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 31.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 30.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 21.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 19.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 19.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 18.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 18.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 18.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 17.6
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 17.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 17.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 7.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.2
FF:10169-103B7 60 years, female 8.3
FF:10153-102I9 76 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.2
Pig sample Sample description nTPM
Subiculum
nTPM: 1.9
Samples: 4

Max nTPM: 2.5
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 2.0
Sample C Male 2.4
Sample D Male 2.5
Dorsal hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 3.2
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 1.6
Sample C Male 2.1
Sample D Male 3.2
Entorhinal cortex
nTPM: 2.2
Samples: 4

Max nTPM: 3.1
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 2.6
Sample C Male 1.7
Sample D Male 3.1
Ventral hippocampus
nTPM: 1.7
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 2.6
Sample C Male 1.2
Sample D Male 1.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68341340 Antisense, RP_041207_01_D05, Mouse strain C57BL/6J (56 days, male) 1.2

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