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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
260.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
176.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
168.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
165.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
155.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
152.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
147.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
146.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
132.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
120.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
109.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
107.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
106.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
99.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
93.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
92.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
90.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
89.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
87.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
83.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
83.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
83.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
82.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
80.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
79.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
79.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
77.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
73.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
71.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
71.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
68.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
64.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
63.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
62.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
62.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
61.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
59.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
56.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
56.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
55.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
52.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
51.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
49.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
45.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
43.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
42.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
39.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
38.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
38.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
38.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
33.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
31.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
27.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMP2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
450.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
348.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
268.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
217.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
181.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
168.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
161.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
160.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
147.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
146.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
146.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
142.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
139.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
134.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
133.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
129.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
127.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
125.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
124.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
123.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
123.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
123.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
122.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
122.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
120.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
119.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
118.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
117.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
117.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
116.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
116.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
116.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
115.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
115.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
115.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
115.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
114.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
113.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
113.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
112.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
111.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
111.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
111.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
111.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
110.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
109.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
109.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
109.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
109.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
108.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
107.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
106.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
105.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
105.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
104.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
104.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
103.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
102.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
102.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
102.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
101.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
101.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
101.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
101.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
100.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
100.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
99.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
98.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
98.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
98.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
98.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
98.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
98.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
98.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
97.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
97.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
97.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
97.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
96.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
96.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
96.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
96.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
95.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
95.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
95.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
95.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
95.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
95.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
95.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
94.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
94.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
94.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
94.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
94.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
92.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
92.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
92.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
92.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
92.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
91.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
91.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
91.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
90.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
90.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
90.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
90.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
90.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
89.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
89.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
89.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
89.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
89.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
88.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
88.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
88.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
88.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
88.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
88.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
88.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
88.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
87.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
87.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
87.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
87.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
87.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
87.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
86.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
86.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
86.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
86.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
86.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
86.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
85.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
85.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
85.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
85.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
85.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
85.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
85.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
85.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
84.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
84.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
84.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
84.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
84.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
84.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
84.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
84.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
83.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
83.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
83.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
82.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
82.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
82.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
82.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
81.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
81.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
81.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
81.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
81.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
81.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
81.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
80.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
80.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
80.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
80.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
80.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
80.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
80.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
80.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
80.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
80.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
79.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
79.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
79.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
79.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
79.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
79.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
79.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
79.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
79.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
78.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
78.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
78.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
78.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
78.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
78.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
78.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
78.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
77.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
77.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
77.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
77.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
77.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
77.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
77.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
77.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
77.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
77.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
77.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
76.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
76.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
76.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
76.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
76.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
76.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
76.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
76.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
76.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
76.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
76.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
76.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
76.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
76.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
76.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
75.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
75.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
75.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
75.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
75.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
75.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
75.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
74.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
74.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
74.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
74.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
73.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
73.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
73.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
73.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
73.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
72.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
72.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
72.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
72.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
72.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
72.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
71.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
71.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
71.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
71.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
71.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
71.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
71.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
71.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
70.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
70.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
70.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
70.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
70.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
70.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
70.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
70.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
70.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
69.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
69.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
69.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
69.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
68.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
68.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
68.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
68.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
68.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
68.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
67.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
67.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
67.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
67.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
67.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
67.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
67.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
67.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
67.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
67.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
66.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
66.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
66.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
66.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
66.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
66.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
66.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
66.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
66.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
66.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
66.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
66.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
66.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
66.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
66.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
65.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
65.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
65.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
65.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
64.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
64.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
64.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
64.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
64.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
64.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
64.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
63.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
63.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
63.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
63.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
63.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
62.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
62.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
62.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
62.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
62.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
62.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
62.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
61.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
61.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
61.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
61.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
61.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
61.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
61.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
61.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
60.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
60.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
60.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
60.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
60.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
60.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
60.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
59.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
59.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
59.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
59.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
59.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
58.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
58.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
58.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
58.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
57.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
57.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
57.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
57.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
57.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
57.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
57.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
56.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
56.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
55.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
55.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
55.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
55.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
55.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
55.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
55.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
55.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
55.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
54.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
54.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
54.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
54.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
54.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
53.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
53.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
53.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
53.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
53.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
52.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
52.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
52.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
52.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
51.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
51.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
51.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
51.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
51.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
51.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
50.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
49.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
49.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
49.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
49.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
49.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
48.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
48.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
48.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
48.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
48.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
48.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
48.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
47.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
47.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
47.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
47.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
47.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
47.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
47.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
46.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
46.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
46.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
45.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
45.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
44.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
44.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
43.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
42.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
42.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
42.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
42.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
42.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
41.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
41.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
41.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
41.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
40.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
40.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
39.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
39.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
39.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
38.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
36.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
36.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
35.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
35.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
35.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
34.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
34.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
33.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
33.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
32.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
31.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
31.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
30.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
30.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
29.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
28.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
28.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
27.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
26.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
25.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
22.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
21.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
19.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMP2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
219.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
187.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
178.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
174.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
166.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
150.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
146.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
146.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
143.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
140.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
138.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
137.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
134.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
133.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
130.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
129.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
128.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
125.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
125.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
125.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
122.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
122.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
121.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
119.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
119.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
119.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
119.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
116.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
116.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
116.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
115.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
115.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
115.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
112.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
112.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
111.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
111.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
111.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
110.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
107.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
106.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
105.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
104.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
103.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
103.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
101.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
101.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
99.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
99.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
99.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
98.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
96.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
96.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
95.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
95.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
94.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
94.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
93.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
92.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
91.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
90.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
89.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
88.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
88.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
87.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
87.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
86.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
86.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
84.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
82.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
82.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
82.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
81.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
81.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
81.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
80.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
80.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
80.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
76.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
75.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
73.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
73.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
72.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
72.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
72.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
68.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
68.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
66.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
64.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
62.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
62.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
55.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
47.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
38.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
303.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
274.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
220.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
206.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
184.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
183.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
159.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
142.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
133.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
131.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
130.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
130.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
120.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
111.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
110.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
110.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
109.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
106.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
105.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
105.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
104.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
103.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
100.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
97.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
95.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
94.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
94.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
93.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
93.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
92.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
91.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
91.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
91.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
91.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
91.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
90.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
89.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
89.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
87.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
87.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
87.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
86.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
85.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
85.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
85.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
85.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
85.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
84.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
84.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
83.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
83.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
83.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
82.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
82.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
82.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
81.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
81.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
80.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
80.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
80.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
80.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
79.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
79.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
78.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
78.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
78.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
78.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
77.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
77.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
76.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
76.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
76.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
76.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
76.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
75.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
75.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
75.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
74.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
74.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
74.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
74.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
72.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
72.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
72.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
71.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
71.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
71.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
70.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
69.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
69.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
69.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
68.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
68.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
68.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
68.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
68.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
68.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
68.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
67.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
67.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
67.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
67.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
67.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
66.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
65.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
65.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
64.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
64.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
64.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
64.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
63.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
63.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
63.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
63.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
63.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
62.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
62.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
62.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
61.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
61.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
60.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
60.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
60.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
60.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
60.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
59.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
59.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
59.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
59.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
59.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
59.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
58.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
56.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
56.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
56.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
55.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
54.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
54.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
54.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
54.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
54.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
53.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
53.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
53.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
52.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
52.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
52.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
52.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
51.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
50.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
50.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
50.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
50.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
49.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
49.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
49.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
49.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
49.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
48.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
48.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
48.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
48.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
47.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
47.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
46.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
44.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
44.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
43.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
42.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
42.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
42.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
42.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
42.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
41.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
41.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
40.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
40.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
40.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
40.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
39.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
38.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
38.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
37.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
37.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
37.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
37.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
36.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
36.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
35.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
35.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
34.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
33.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
32.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
32.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
31.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
30.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
30.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
29.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
29.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
28.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
28.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
26.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
25.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
24.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
24.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
23.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.9
CPT0078660003
Tumor
1.6
CPT0026420001
Normal
0.7
CPT0012180003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0084590001
Normal
0.6
CPT0014160003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0064370003
Tumor
0.5
CPT0002270011
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0025050003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0065430003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0088690003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0086030003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0086360003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0088710001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0092730003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0015810003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0081620001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0001510001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0078930003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0011410003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0079000001
Normal
-0.4
CPT0006900003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0015910003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0086870003
Tumor
-0.5
CPT0000660001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0000870016
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0025920001
Normal
-0.5
CPT0065870003
Tumor
-0.5
CPT0081600003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0020130001
Normal
-0.5
CPT0078990003
Tumor
-0.5
CPT0025110003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0009080003
Normal
-0.7
CPT0088630003
Tumor
-0.7
CPT0017410003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
