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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDK2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
116.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
115.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
73.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
71.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
65.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
64.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
60.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
54.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
52.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
48.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
47.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
45.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
42.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
41.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
36.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
33.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
28.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
25.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
25.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
24.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
22.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
22.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
21.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
17.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDK2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
146.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
138.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
124.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
120.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
119.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
109.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
108.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
104.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
104.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
103.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
101.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
100.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
100.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
99.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
97.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
96.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
96.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
94.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
92.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
91.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
91.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
90.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
90.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
89.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
89.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
88.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
88.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
87.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
86.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
85.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
85.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
84.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
83.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
83.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
82.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
82.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
82.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
82.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
82.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
81.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
81.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
81.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
81.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
80.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
80.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
79.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
78.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
77.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
77.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
76.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
76.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
75.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
75.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
73.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
73.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
73.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
72.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
72.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
72.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
71.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
71.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
71.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
71.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
71.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
70.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
69.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
69.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
69.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
69.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
69.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
69.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
69.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
69.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
68.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
68.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
68.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
68.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
68.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
68.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
67.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
67.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
66.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
66.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
66.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
66.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
65.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
65.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
65.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
65.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
64.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
64.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
64.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
64.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
64.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
63.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
63.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
63.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
63.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
63.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
63.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
63.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
63.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
63.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
62.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
62.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
62.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
62.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
62.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
62.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
62.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
62.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
61.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
61.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
61.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
60.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
60.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
60.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
60.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
60.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
59.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
58.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
58.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
58.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
58.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
58.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
58.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
57.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
57.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
57.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
57.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
57.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
57.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
57.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
57.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
57.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
57.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
57.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
57.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
56.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
56.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
56.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
56.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
56.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
56.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
56.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
56.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
56.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
55.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
55.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
55.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
55.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
54.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
54.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
54.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
53.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
53.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
53.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
53.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
52.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
52.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
52.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
52.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
52.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
52.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
52.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
52.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
52.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
52.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
52.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
51.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
51.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
51.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
51.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
51.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
51.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
50.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
50.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
50.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
50.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
49.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
49.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
49.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
49.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
49.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
49.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
49.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
48.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
48.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
48.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
48.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
48.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
48.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
48.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
48.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
48.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
47.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
47.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
47.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
47.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
47.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
47.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
46.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
46.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
46.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
46.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
45.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
45.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
45.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
45.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
45.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
45.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
45.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
45.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
44.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
44.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
44.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
44.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
44.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
44.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
44.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
44.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
43.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
43.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
43.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
43.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
43.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
43.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
43.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
43.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
43.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
43.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
42.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
41.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
41.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
41.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
41.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
41.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
41.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
40.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
40.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
40.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
40.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
40.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
40.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
40.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
40.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
39.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
39.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
38.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
38.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
37.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
37.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
37.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
37.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
37.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
37.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
36.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
36.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
36.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
36.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
36.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
36.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
36.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
35.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
35.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
35.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
34.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
34.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
34.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
34.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
34.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
34.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
34.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
33.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
32.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
32.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
32.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
32.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
31.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
31.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
30.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
30.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
30.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
30.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
30.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
29.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
28.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
28.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
28.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
25.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
25.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
25.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
25.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
23.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
22.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
17.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
17.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
16.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
16.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
13.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
7.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDK2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
79.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
72.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
67.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
62.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
61.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
59.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
57.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
56.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
56.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
55.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
53.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
51.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
48.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
47.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
47.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
47.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
47.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
46.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
44.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
43.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
42.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
39.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
38.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
38.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
38.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
36.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
33.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
31.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
29.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
26.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
26.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDK2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
155.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
143.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
140.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
138.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
134.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
125.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
121.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
118.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
117.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
115.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
113.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
113.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
110.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
105.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
104.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
103.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
103.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
101.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
101.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
96.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
94.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
93.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
93.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
93.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
90.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
90.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
89.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
87.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
87.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
86.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
86.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
85.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
84.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
84.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
83.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
83.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
82.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
82.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
81.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
81.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
80.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
79.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
78.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
77.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
77.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
77.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
77.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
76.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
75.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
75.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
75.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
75.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
75.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
74.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
74.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
72.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
72.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
70.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
70.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
70.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
69.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
68.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
67.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
67.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
67.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
67.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
67.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
66.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
66.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
66.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
66.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
66.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
66.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
66.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
65.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
64.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
64.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
64.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
64.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
64.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
63.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
63.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
63.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
63.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
63.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
62.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
62.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
62.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
62.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
62.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
61.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
61.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
61.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
61.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
60.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
60.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
60.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
59.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
58.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
58.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
58.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
58.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
57.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
57.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
57.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
57.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
57.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
57.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
56.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
56.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
56.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
55.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
55.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
55.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
54.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
54.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
54.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
53.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
53.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
53.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
53.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
52.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
52.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
52.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
52.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
52.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
51.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
51.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
51.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
51.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
51.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
50.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
50.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
50.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
50.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
50.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
50.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
50.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
49.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
49.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
49.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
48.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
48.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
48.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
48.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
48.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
48.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
47.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
46.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
46.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
46.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
46.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
46.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
46.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
45.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
45.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
43.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
43.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
43.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
42.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
42.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
42.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
40.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
40.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
40.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
39.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
39.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
39.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
38.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
38.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
38.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
38.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
38.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
37.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
36.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
36.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
36.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
36.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
36.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
36.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
34.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
33.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
32.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
32.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
31.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
31.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
30.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
30.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
29.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
28.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
27.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
27.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
26.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
24.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
24.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088780001
Normal
1.2
CPT0001500009
Tumor
1.0
CPT0000790001
Normal
0.9
CPT0009080003
Normal
0.8
CPT0086890003
Normal
0.8
CPT0092800003
Normal
0.8
CPT0092740003
Normal
0.8
CPT0065450001
Normal
0.8
CPT0012770003
Normal
0.7
CPT0077500001
Normal
0.7
CPT0079000001
Normal
0.7
CPT0006950001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0010170001
Normal
0.7
CPT0012900004
Tumor
0.7
CPT0012570003
Normal
0.7
CPT0088500001
Normal
0.7
CPT0012090003
Normal
0.7
CPT0023710001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0088920001
Normal
0.7
CPT0026420001
Normal
0.6
CPT0078670001
Normal
0.6
CPT0006730001
Normal
0.6
CPT0066430001
Normal
0.6
CPT0077140001
Normal
0.6
CPT0092310003
Normal
0.6
CPT0002270011
Tumor
0.6
CPT0078840001
Normal
0.6
CPT0078940001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0025060001
Normal
0.6
CPT0082010001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0086370003
Normal
0.5
CPT0000890001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0007870001
Normal
0.5
CPT0088710001
Normal
0.5
CPT0009060003
Tumor
0.5
CPT0086970003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0012290003
Normal
0.3
CPT0007470001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0063330001
Normal
0.3
CPT0086870003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0018250001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0025920001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0064370003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0014370004
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0001550001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0015810003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0001190001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0012080003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0014160003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0007860003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0081990003
Tumor
-0.6
CPT0092160003
Tumor
-0.6
CPT0075170001
Normal
-0.6
CPT0025290003
Tumor
-0.6
CPT0092790003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0019130003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0000640003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0088760003
Tumor
-0.6
CPT0075560003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0002350011
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0012280003
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0069000003
Tumor
-0.8
CPT0076330003
Tumor
-0.8
CPT0025230003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0065930003
Tumor
-0.8
CPT0078800003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0079230003
Tumor
-0.8
CPT0086360003
Tumor
-0.8
CPT0086820003
Tumor
-0.8
CPT0017410003
Tumor
-0.9
CPT0025580004
Tumor
-0.9
CPT0001270001
Normal
-0.9
CPT0075130003
Tumor
-0.9
CPT0001180009
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0092190003
Normal
-1.0
CPT0011410003
Tumor
-1.0
CPT0023350003
Tumor
-1.0
CPT0065430003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0001340003
Tumor
-1.0
CPT0069160003
Tumor
-1.0
CPT0012180003
Tumor
-1.0
CPT0012550003
Tumor
-1.1
CPT0084590001
Normal
-1.1
CPT0092730003
Tumor
-1.1
CPT0077320001
Normal
-1.2
CPT0017850003
Tumor
-1.3
CPT0079380003
Tumor
-1.6
CPT0084560003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
