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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPPL2B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
57.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
54.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
35.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
34.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
32.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
31.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
27.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
26.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
25.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
24.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
23.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
23.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPPL2B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
46.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
45.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
44.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
42.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
41.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
37.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
35.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
35.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
33.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
33.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
33.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
32.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
31.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
31.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
31.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
31.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
30.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
30.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
30.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
29.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
29.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
29.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
29.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
29.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
28.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
28.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
28.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
27.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
27.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
27.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
27.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
27.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
26.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
26.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
26.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
26.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
25.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
25.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
24.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
23.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
23.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
22.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
22.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
22.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
21.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
21.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
21.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
20.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
20.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
19.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
18.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
17.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
17.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
12.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPPL2B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
55.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
44.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
43.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
41.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
37.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
36.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
33.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
32.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
29.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
29.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPPL2B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
89.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
84.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
83.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
75.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
71.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
69.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
64.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
64.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
60.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
60.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
56.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
55.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
55.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
54.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
53.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
53.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
52.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
49.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
49.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
49.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
49.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
48.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
45.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
44.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
44.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
44.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
44.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
42.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
41.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
41.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
40.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
40.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
39.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
38.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
38.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
38.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
38.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
37.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
37.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
37.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
36.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
36.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
36.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
36.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
35.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
35.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
35.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
35.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
34.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
34.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
33.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
33.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
33.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
32.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
32.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
32.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
32.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
32.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
31.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
31.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
31.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
31.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
30.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
30.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
29.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
29.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
29.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
28.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
28.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
27.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
27.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
27.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
27.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
27.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
27.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
26.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
25.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
24.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
22.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
17.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0064370003
Tumor
1.1
CPT0006900003
Tumor
0.9
CPT0015730003
Tumor
0.9
CPT0065750003
Tumor
0.9
CPT0025290003
Tumor
0.8
CPT0025170003
Tumor
0.7
CPT0076330003
Tumor
0.7
CPT0007860003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0078930003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0006730001
Normal
0.5
CPT0020120003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0086360003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0081620001
Normal
0.4
CPT0092790003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0001500009
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0025920001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0001220008
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0079230003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0020130001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0001260009
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0063630003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0088570001
Normal
-0.3
CPT0069160003
Tumor
-0.3
CPT0024680001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0092190003
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0026410003
Tumor
-0.4
CPT0007870001
Normal
-0.4
CPT0085670003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0025050003
Tumor
-0.4
CPT0010120001
Normal
-0.4
CPT0077490003
Tumor
-0.4
CPT0092730003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0088760003
Tumor
-0.6
CPT0025350003
Tumor
-0.6
CPT0079300001
Normal
-0.8
CPT0088970003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0000790001
Normal
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0002270011
Tumor
N/A
CPT0017850003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001550001
Normal
N/A
CPT0012080003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0066520001
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001540009
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0079430001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
