HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:22.9 nTPM
HPA Brain:28.5 nTPM
GTEx:22.9 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:7.2 nTPM
Mouse:15.2 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005592
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.2
2529 Female, age 94, left hemisphere 31.5
2148 Female, age 91, left hemisphere 30.9
1911 Female, age 85, right hemisphere 27.2
1898 Male, age 80, left hemisphere 25.5
1855 Male, age 76, left hemisphere 25.4
2621 Female, age 67, right hemisphere 22.7
Dentate gyrus
nTPM: 27.3
2528 Male, age 74, both hemispheres 31.4
2530 Female, age 94, left hemisphere 30.3
2246 Female, age 85, both hemispheres 27.9
1927 Female, age 91, both hemispheres 26.4
2531 Female, age 67, both hemispheres 25.0
2010 Male, age 76, both hemispheres 22.8
Entorhinal gyrus
nTPM: 25.6
2117 Female, age 91, right hemisphere 29.4
2686 Male, age 75, right hemisphere 27.9
2764 Male, age 80, right hemisphere 27.6
2613 Female, age 94, left hemisphere 26.4
1787 Male, age 76, left hemisphere 23.9
1938 Female, age 85, left hemisphere 18.0
Hippocampus, CA1
nTPM: 26.1
2082 Female, age 91, right hemisphere 32.4
2527 Male, age 74, both hemispheres 27.5
1873 Female, age 85, both hemispheres 26.1
2749 Male, age 80, left hemisphere 23.2
2045 Male, age 76, both hemispheres 21.5
Hippocampus, CA2
nTPM: 28.5
2249 Male, age 74, both hemispheres 31.3
2113 Female, age 91, right hemisphere 30.6
1940 Female, age 85, left hemisphere 30.0
2437 Female, age 94, left hemisphere 29.1
1963 Male, age 80, left hemisphere 27.5
1892 Male, age 76, both hemispheres 22.6
Hippocampus, CA3
nTPM: 27.4
2620 Female, age 94, left hemisphere 32.7
2436 Male, age 74, both hemispheres 31.1
2861 Female, age 67, both hemispheres 26.1
1891 Female, age 85, both hemispheres 25.6
1867 Male, age 76, both hemispheres 25.0
2137 Male, age 80, left hemisphere 24.2
Parahippocampal cortex
nTPM: 25.4
2622 Female, age 67, right hemisphere 32.4
2692 Male, age 74, both hemispheres 28.6
1990 Female, age 91, right hemisphere 27.0
2250 Female, age 67, right hemisphere 25.5
2693 Female, age 94, both hemispheres 25.3
1933 Female, age 85, both hemispheres 24.1
2018 Male, age 76, both hemispheres 23.8
2245 Female, age 91, both hemispheres 23.7
2532 Female, age 72, left hemisphere 22.8
1850 Male, age 80, both hemispheres 20.6
Perirhinal gyrus
nTPM: 22.9
2521 Female, age 94, right hemisphere 27.0
1794 Male, age 80, right hemisphere 25.1
1847 Female, age 91, left hemisphere 21.8
2848 Male, age 76, right hemisphere 20.5
1841 Female, age 85, right hemisphere 19.8
Subiculum
nTPM: 27.3
2729 Female, age 91, right hemisphere 32.9
2619 Male, age 74, both hemispheres 31.1
1901 Male, age 80, both hemispheres 26.3
1977 Female, age 85, both hemispheres 25.8
2438 Female, age 94, left hemisphere 24.1
2042 Male, age 76, both hemispheres 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 37.7
Min nTPM: 7.3
Std nTPM: 6.0
Median nTPM: 22.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 37.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 37.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 37.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 36.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 35.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 34.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 34.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 34.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 34.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 34.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.7
FF:10153-102I9 76 years, female 36.6
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 7.2
Pig sample Sample description nTPM
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.4
Sample A Female 6.8
Sample B Female 5.4
Sample C Male 6.2
Sample D Male 5.8
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.9
Sample A Female 8.6
Sample B Female 7.4
Sample C Male 6.9
Sample D Male 5.9
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.9
Sample A Female 7.5
Sample B Female 6.5
Sample C Male 5.9
Sample D Male 6.2
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.0
Sample A Female 6.6
Sample B Female 5.0
Sample C Male 7.9
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.1
Sample A Male 14.1
Sample B Male 15.6
Sample C Female 14.2
Sample D Female 16.4
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 14.2
Sample C Female 17.4
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69407487 Antisense, RP_050414_01_G05, Mouse strain C57BL/6J (56 days, male) 2.1

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