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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
46.8
nTPM
HPA Brain:
81.3
nTPM
GTEx:
46.8
nTPM
FANTOM5:
127.2
Scaled Tags Per Million
Pig:
61.9
nTPM
Mouse:
93.9
nTPM
Allen mouse:
15.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
81.3
Sample id
Sample description
nTPM
Amygdala nTPM: 81.3
2517
Female, age 94, left hemisphere
87.9
2814
Male, age 76, right hemisphere
85.7
2514
Male, age 75, right hemisphere
79.5
1987
Female, age 91, left hemisphere
77.9
2695
Female, age 67, right hemisphere
75.3
Basal amygdala nTPM: 74.5
2685
Female, age 94, left hemisphere
80.5
2110
Male, age 80, left hemisphere
77.7
2243
Female, age 91, right hemisphere
77.5
2609
Male, age 75, right hemisphere
76.6
1955
Male, age 76, both hemispheres
69.5
2827
Female, age 67, right hemisphere
65.1
Central amygdala nTPM: 79.3
2826
Female, age 94, left hemisphere
93.5
2701
Female, age 91, right hemisphere
78.0
2239
Male, age 80, left hemisphere
75.6
1905
Male, age 76, both hemispheres
75.3
2515
Male, age 75, right hemisphere
74.2
Corticomedial amygdala nTPM: 71.2
2429
Female, age 94, left hemisphere
75.7
2240
Male, age 76, both hemispheres
74.3
2829
Male, age 80, left hemisphere
74.0
2428
Male, age 75, right hemisphere
70.0
2242
Female, age 91, right hemisphere
67.3
2535
Female, age 67, right hemisphere
65.7
Lateral amygdala nTPM: 75.6
2534
Female, age 94, left hemisphere
82.9
2516
Male, age 75, right hemisphere
77.1
2256
Male, age 80, left hemisphere
75.0
2830
Female, age 67, right hemisphere
73.6
2255
Female, age 91, right hemisphere
73.0
1883
Male, age 76, both hemispheres
72.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 46.8
Samples: 152
Max nTPM: 376.3
Min nTPM: 15.1
Std nTPM: 48.0
Median nTPM: 33.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
376.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
367.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
190.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
165.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
160.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
149.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
147.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
132.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
131.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
126.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
123.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
122.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
97.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
87.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
67.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
63.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
60.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
58.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
57.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
52.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
50.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
49.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
49.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
48.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
47.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
47.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
47.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
46.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
46.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
46.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
46.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
46.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
44.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
43.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
42.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
42.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
42.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
41.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
41.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
40.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
39.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
39.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
39.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
39.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
39.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
39.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
38.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
38.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
38.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
38.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
37.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
37.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
37.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
36.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
36.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
36.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
36.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
36.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
35.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
35.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
35.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
35.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
34.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
33.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
33.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
33.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
32.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
32.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
32.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
31.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
31.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
31.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
31.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
31.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
31.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
30.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
30.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
30.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
30.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
30.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
30.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
30.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
29.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
29.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
29.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
29.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
29.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
29.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
29.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
29.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
29.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
29.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
29.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
28.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
28.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
28.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
28.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
28.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
28.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
28.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
27.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
27.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
26.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
26.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
26.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
26.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
26.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
26.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
25.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
25.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
25.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
25.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
25.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
24.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
24.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
23.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
23.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
23.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
22.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
22.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
21.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
21.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
21.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
20.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
20.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
19.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
19.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
18.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
15.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
93.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 93.9
Samples: 4
Max nTPM: 99.5
Min nTPM: 89.4
Sample A
Male
91.4
Sample B
Male
95.2
Sample C
Female
99.5
Sample D
Female
89.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.