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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLXND1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
117.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
112.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
65.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
42.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
36.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
35.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
26.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
15.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
2.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLXND1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
390.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
284.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
267.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
242.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
210.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
198.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
194.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
194.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
192.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
192.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
183.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
175.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
173.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
168.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
168.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
166.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
163.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
163.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
163.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
162.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
161.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
161.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
159.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
154.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
146.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
145.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
144.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
143.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
142.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
141.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
139.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
138.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
138.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
137.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
137.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
137.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
137.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
135.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
134.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
129.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
129.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
126.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
125.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
123.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
123.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
121.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
120.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
119.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
119.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
118.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
117.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
117.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
115.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
114.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
114.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
114.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
113.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
113.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
113.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
113.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
112.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
112.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
112.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
111.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
111.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
111.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
111.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
110.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
108.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
108.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
107.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
105.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
105.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
104.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
104.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
104.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
104.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
104.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
104.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
103.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
102.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
102.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
102.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
101.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
101.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
101.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
99.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
99.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
99.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
98.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
98.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
98.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
98.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
97.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
97.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
97.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
97.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
96.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
96.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
95.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
95.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
95.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
95.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
95.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
95.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
95.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
94.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
94.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
93.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
93.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
93.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
92.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
91.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
91.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
91.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
90.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
89.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
89.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
89.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
89.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
89.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
89.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
89.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
89.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
88.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
88.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
88.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
88.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
87.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
84.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
84.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
83.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
83.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
83.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
83.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
83.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
83.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
83.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
82.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
82.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
82.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
82.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
82.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
82.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
81.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
81.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
80.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
80.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
80.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
80.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
79.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
79.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
79.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
79.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
78.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
78.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
78.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
77.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
77.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
77.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
77.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
77.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
76.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
76.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
75.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
74.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
74.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
74.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
74.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
74.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
74.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
74.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
74.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
73.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
73.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
73.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
73.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
72.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
72.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
72.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
72.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
71.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
71.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
71.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
71.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
71.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
71.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
70.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
70.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
70.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
70.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
70.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
70.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
70.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
70.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
70.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
69.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
68.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
68.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
68.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
68.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
67.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
67.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
67.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
67.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
67.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
66.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
66.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
66.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
65.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
65.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
65.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
65.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
65.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
64.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
64.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
64.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
64.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
64.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
63.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
63.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
63.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
63.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
63.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
63.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
62.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
62.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
62.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
61.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
61.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
61.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
61.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
61.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
61.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
60.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
60.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
60.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
60.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
60.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
60.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
60.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
60.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
59.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
59.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
58.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
58.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
58.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
58.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
58.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
58.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
58.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
57.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
57.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
56.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
56.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
56.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
56.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
55.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
55.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
54.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
54.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
53.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
53.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
53.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
53.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
53.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
53.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
52.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
52.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
52.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
52.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
52.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
52.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
52.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
52.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
51.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
51.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
51.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
51.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
51.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
51.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
51.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
51.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
51.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
50.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
50.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
50.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
50.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
50.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
50.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
49.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
49.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
49.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
48.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
48.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
48.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
47.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
47.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
47.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
47.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
47.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
46.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
46.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
46.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
46.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
45.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
45.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
44.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
44.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
43.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
43.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
42.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
42.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
42.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
42.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
42.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
42.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
42.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
42.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
41.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
41.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
40.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
40.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
39.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
39.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
39.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
38.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
38.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
37.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
37.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
37.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
37.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
37.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
37.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
37.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
36.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
36.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
35.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
35.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
34.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
33.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
32.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
30.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
30.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
30.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
29.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
29.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
29.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
28.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
28.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
28.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
27.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
27.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
27.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
25.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
24.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
23.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
23.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
22.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
22.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLXND1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
238.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
197.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
189.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
150.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
140.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
131.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
122.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
122.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
118.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
116.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
109.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
108.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
107.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
104.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
103.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
102.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
101.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
101.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
98.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
98.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
96.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
95.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
95.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
94.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
91.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
90.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
84.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
84.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
82.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
82.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
81.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
80.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
80.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
80.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
75.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
73.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
73.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
71.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
69.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
68.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
66.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
65.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
65.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
64.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
64.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
62.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
60.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
60.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
60.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
59.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
59.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
58.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
58.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
57.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
55.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
53.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
53.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
51.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
50.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
47.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
46.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
41.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
40.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
38.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
36.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
34.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
33.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
33.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
27.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PLXND1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
138.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
97.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
89.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
84.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
60.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
56.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
56.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
55.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
50.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
48.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
41.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
36.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
36.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
35.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
35.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
34.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
34.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
33.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
30.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
26.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
26.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
25.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
25.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
22.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
19.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
19.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
18.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
17.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
11.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
9.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
8.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
7.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
7.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
7.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
5.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
5.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
5.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
4.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
4.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
4.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
3.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
2.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
2.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
2.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
2.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
1.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
1.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
1.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.8
CPT0092730003
Tumor
0.9
CPT0088760003
Tumor
0.8
CPT0086030003
Tumor
0.8
CPT0025350003
Tumor
0.8
CPT0066470004
Tumor
0.7
CPT0092290003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0088630003
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0088550004
Tumor
0.7
CPT0065690003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0006630003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0007860003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0025290003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0012080003
Tumor
0.6
CPT0019990003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0079480003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0087040003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0079230003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0021240003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0012550003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0006900003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0012900004
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0019130003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0001510001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088640003
Normal
-0.3
CPT0024670003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0084560003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0088570001
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0065820001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0007870001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0092190003
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0009060003
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0001270001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0088780001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0011410003
Tumor
-0.5
CPT0089480003
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0001190001
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0001350001
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0092740003
Normal
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
