HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:29.3 nTPM
HPA Brain:63.8 nTPM
GTEx:29.3 nTPM
FANTOM5:56.9 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:83.1 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040445Antibody CAB034464
Glial cells HighMedium
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 63.8
Sample id Sample description nTPM
Hippocampus
nTPM: 61.3
1855 Male, age 76, left hemisphere 69.8
1898 Male, age 80, left hemisphere 69.6
2621 Female, age 67, right hemisphere 65.1
2529 Female, age 94, left hemisphere 56.7
1911 Female, age 85, right hemisphere 53.9
2148 Female, age 91, left hemisphere 52.6
Dentate gyrus
nTPM: 59.7
2010 Male, age 76, both hemispheres 76.7
2528 Male, age 74, both hemispheres 61.3
2246 Female, age 85, both hemispheres 60.5
1927 Female, age 91, both hemispheres 60.1
2530 Female, age 94, left hemisphere 55.3
2531 Female, age 67, both hemispheres 44.6
Entorhinal gyrus
nTPM: 56.3
2117 Female, age 91, right hemisphere 63.5
1787 Male, age 76, left hemisphere 62.6
1938 Female, age 85, left hemisphere 60.3
2764 Male, age 80, right hemisphere 58.5
2613 Female, age 94, left hemisphere 52.6
2686 Male, age 75, right hemisphere 40.2
Hippocampus, CA1
nTPM: 63.8
2749 Male, age 80, left hemisphere 75.5
2045 Male, age 76, both hemispheres 74.5
2082 Female, age 91, right hemisphere 58.5
1873 Female, age 85, both hemispheres 55.4
2527 Male, age 74, both hemispheres 54.9
Hippocampus, CA2
nTPM: 60.5
1892 Male, age 76, both hemispheres 68.7
1963 Male, age 80, left hemisphere 66.5
1940 Female, age 85, left hemisphere 62.9
2113 Female, age 91, right hemisphere 58.6
2249 Male, age 74, both hemispheres 54.3
2437 Female, age 94, left hemisphere 52.2
Hippocampus, CA3
nTPM: 58.1
2137 Male, age 80, left hemisphere 69.6
1867 Male, age 76, both hemispheres 64.8
1891 Female, age 85, both hemispheres 57.5
2436 Male, age 74, both hemispheres 55.4
2620 Female, age 94, left hemisphere 55.1
2861 Female, age 67, both hemispheres 45.9
Parahippocampal cortex
nTPM: 55.5
2018 Male, age 76, both hemispheres 66.2
2532 Female, age 72, left hemisphere 60.6
1850 Male, age 80, both hemispheres 60.3
2250 Female, age 67, right hemisphere 58.0
1990 Female, age 91, right hemisphere 55.9
2693 Female, age 94, both hemispheres 54.9
2245 Female, age 91, both hemispheres 54.6
1933 Female, age 85, both hemispheres 53.8
2692 Male, age 74, both hemispheres 52.0
2622 Female, age 67, right hemisphere 38.9
Perirhinal gyrus
nTPM: 62.8
1847 Female, age 91, left hemisphere 68.5
1794 Male, age 80, right hemisphere 65.3
1841 Female, age 85, right hemisphere 65.1
2848 Male, age 76, right hemisphere 59.5
2521 Female, age 94, right hemisphere 55.3
Subiculum
nTPM: 60.9
2438 Female, age 94, left hemisphere 68.2
2042 Male, age 76, both hemispheres 63.0
2729 Female, age 91, right hemisphere 60.5
2619 Male, age 74, both hemispheres 58.7
1977 Female, age 85, both hemispheres 58.3
1901 Male, age 80, both hemispheres 56.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 59.8
Min nTPM: 14.2
Std nTPM: 9.0
Median nTPM: 28.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 59.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 56.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 55.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 54.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 54.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 51.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 50.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 49.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 49.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.9
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 47.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.0
Pig sample Sample description nTPM
Subiculum
nTPM: 31.3
Samples: 4

Max nTPM: 36.7
Min nTPM: 28.2
Sample A Female 36.7
Sample B Female 28.2
Sample C Male 31.7
Sample D Male 28.5
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 46.2
Min nTPM: 28.4
Sample A Female 46.2
Sample B Female 37.3
Sample C Male 36.2
Sample D Male 28.4
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.1
Sample A Female 33.8
Sample B Female 31.7
Sample C Male 27.1
Sample D Male 27.3
Ventral hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 40.6
Min nTPM: 24.5
Sample A Female 35.4
Sample B Female 24.5
Sample C Male 39.4
Sample D Male 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 83.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.5
Samples: 4

Max nTPM: 73.5
Min nTPM: 66.0
Sample A Male 73.5
Sample B Male 72.9
Sample C Female 73.4
Sample D Female 66.0
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 86.6
Min nTPM: 78.8
Sample A Male 86.6
Sample B Male 82.4
Sample C Female 84.6
Sample D Female 78.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69134268 Antisense, RP_050321_02_F06, Mouse strain C57BL/6J (56 days, male) 1.0

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