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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX11 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
52.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
18.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
15.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
8.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX11 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
36.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
23.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
19.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
19.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
18.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
15.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
14.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
13.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
12.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
10.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
7.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX11 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
22.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
19.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
18.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
18.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
15.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
5.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX11 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
44.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
42.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
38.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
35.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
34.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
32.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
30.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
29.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
29.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
28.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
28.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
27.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
27.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
26.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
24.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
21.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
21.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
19.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
18.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
16.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
12.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
12.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
9.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
7.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
1.0
CPT0014160003
Tumor
1.0
CPT0002270011
Tumor
0.9
CPT0020120003
Tumor
0.8
CPT0092290003
Tumor
0.7
CPT0089460004
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0012180003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0025580004
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0066470004
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0089040001
Normal
0.3
CPT0018250001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0065690003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0078800003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0023710001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0009020003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0006730001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0021240003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0087040003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0001220008
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0000780007
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0010120001
Normal
-0.6
CPT0088630003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
