Immune cell sample data (HPA)

Transcript expression levels summarized per gene in 109 immune cell samples. "rna_immune_cell_sample.tsv.zip" includes Ensembl gene identifier ("Gene"), analysed sample ("Immune cell"), donor ("Donor"), transcripts per million ("TPM"), protein-coding transcripts per million ("pTPM").

Samples

Cell type
HPA sample ID
Sex
basophil976Female
basophil995Female
basophil1022Male
basophil1040Female
classical monocyte941Male
classical monocyte958Male
classical monocyte977Female
classical monocyte996Female
classical monocyte1018Male
classical monocyte1045Female
eosinophil940Male
eosinophil959Male
eosinophil978Female
eosinophil997Female
eosinophil1016Male
eosinophil1039Female
gdT-cell945Male
gdT-cell960Male
gdT-cell979Female
gdT-cell998Female
gdT-cell1015Male
gdT-cell1036Female
intermediate monocyte942Male
intermediate monocyte961Male
intermediate monocyte980Female
intermediate monocyte999Female
intermediate monocyte1019Male
intermediate monocyte1046Female
MAIT T-cell944Male
MAIT T-cell962Male
MAIT T-cell981Female
MAIT T-cell1000Female
MAIT T-cell1021Male
MAIT T-cell1035Female
memory B-cell955Male
memory B-cell963Male
memory B-cell982Female
memory B-cell1001Female
memory B-cell1030Male
memory B-cell1043Female
memory CD4 T-cell952Male
memory CD4 T-cell964Male
memory CD4 T-cell983Female
memory CD4 T-cell1002Female
memory CD4 T-cell1024Male
memory CD4 T-cell1051Female
memory CD8 T-cell950Male
memory CD8 T-cell965Male
memory CD8 T-cell984Female
memory CD8 T-cell1003Female
memory CD8 T-cell1049Female
myeloid DC948Male
myeloid DC966Male
myeloid DC985Female
myeloid DC1004Female
myeloid DC1028Male
naive B-cell949Male
naive B-cell967Male
naive B-cell986Female
naive B-cell1005Female
naive B-cell1029Male
naive B-cell1042Female
naive CD4 T-cell953Male
naive CD4 T-cell968Male
naive CD4 T-cell987Female
naive CD4 T-cell1006Female
naive CD4 T-cell1023Male
naive CD4 T-cell1050Female
naive CD8 T-cell954Male
naive CD8 T-cell969Male
naive CD8 T-cell988Female
naive CD8 T-cell1007Female
naive CD8 T-cell1025Male
naive CD8 T-cell1048Female
neutrophil957Male
neutrophil970Male
neutrophil989Female
neutrophil1008Female
neutrophil1017Male
neutrophil1034Female
NK-cell951Male
NK-cell971Male
NK-cell990Female
NK-cell1009Female
NK-cell1031Male
NK-cell1041Female
non-classical monocyte943Male
non-classical monocyte991Female
non-classical monocyte1010Female
non-classical monocyte1020Male
non-classical monocyte1047Female
plasmacytoid DC947Male
plasmacytoid DC973Male
plasmacytoid DC992Female
plasmacytoid DC1011Female
plasmacytoid DC1027Male
plasmacytoid DC1037Female
T-reg956Male
T-reg975Male
T-reg994Female
T-reg1013Female
T-reg1032Male
T-reg1044Female
total PBMC946Male
total PBMC974Male
total PBMC993Female
total PBMC1012Female
total PBMC1014Male
total PBMC1033Female
Download: rna_immune_cell_samples.tsv.zip | 109 lines

Immune cell data (HPA)

Transcript expression levels summarized per gene in 18 cell types and total PBMC. The tab-separated file includes Ensembl gene identifier ("Gene"), analysed sample ("Immune cell"), transcripts per million ("TPM"), protein-coding transcripts per million ("pTPM") and normalized expression ("nTPM").

Immune cells

Immune cell
Lineage
basophilgranulocytes
classical monocytemonocytes
eosinophilgranulocytes
gdT-cellT-cells
intermediate monocytemonocytes
MAIT T-cellT-cells
memory B-cellB-cells
memory CD4 T-cellT-cells
memory CD8 T-cellT-cells
myeloid DCdendritic cells
naive B-cellB-cells
naive CD4 T-cellT-cells
naive CD8 T-cellT-cells
neutrophilgranulocytes
NK-cellNK-cells
non-classical monocytemonocytes
plasmacytoid DCdendritic cells
T-regT-cells
total PBMCtotal PBMC
Download: rna_immune_cell_immune_cells.tsv.zip | 19 lines

Immune cell data (Schmiedel)

Transcript expression levels summarized per gene in 15 immune cell types. The tab-separated file includes Ensembl gene identifier ("Gene"), analysed sample ("Immune cell") and transcripts per million ("TPM"). The data was obtained from Schmiedel publication and is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

Immune cells

Immune cell
Lineage
classical monocytemonocytes
Memory CD4 T-cell TFHT-cells
Memory CD4 T-cell Th1T-cells
Memory CD4 T-cell Th1/Th17T-cells
Memory CD4 T-cell Th17T-cells
Memory CD4 T-cell Th2T-cells
Memory T-regT-cells
naive B-cellB-cells
naive CD4 T-cellT-cells
Naive CD4 T-cell activatedT-cells
naive CD8 T-cellT-cells
Naive CD8 T-cell activatedT-cells
Naive T-regT-cells
NK-cellNK-cells
non-classical monocytemonocytes
Download: rna_immune_cell_schmiedel_immune_cells.tsv.zip | 15 lines

Immune cell data (Monaco)

Transcript expression levels summarized per gene in 30 immune cell types. The tab-separated file includes Ensembl gene identifier ("Gene"), analysed sample ("Immune cell"), transcripts per million ("TPM") and protein-coding transcripts per million ("pTPM"). The data was obtained from Monaco publication and is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

Immune cells

Immune cell
Lineage
basophilgranulocytes
Central memory CD8 T-cellT-cells
classical monocytemonocytes
Effector memory CD8 T-cellT-cells
Exhausted memory B-cellB-cells
intermediate monocytemonocytes
MAIT T-cellT-cells
Memory CD4 T-cell TFHT-cells
Memory CD4 T-cell Th1T-cells
Memory CD4 T-cell Th1/Th17T-cells
Memory CD4 T-cell Th17T-cells
Memory CD4 T-cell Th2T-cells
myeloid DCdendritic cells
naive B-cellB-cells
naive CD4 T-cellT-cells
naive CD8 T-cellT-cells
neutrophilgranulocytes
NK-cellNK-cells
non-classical monocytemonocytes
Non-switched memory B-cellB-cells
Non-Vd2 gdTCRT-cells
PlasmablastB-cells
plasmacytoid DCdendritic cells
Progenitor cellProgenitors
Switched memory B-cellB-cells
T-regT-cells
Terminal effector memory CD4 T-cellT-cells
Terminal effector memory CD8 T-cellT-cells
total PBMCtotal PBMC
Vd2 gdTCRT-cells
Download: rna_immune_cell_monaco_immune_cells.tsv.zip | 30 lines