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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCO2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
67.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
64.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
58.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
56.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
54.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
47.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
47.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
44.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
41.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
40.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
40.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
34.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
34.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
32.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
28.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
26.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
24.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
23.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
23.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
19.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
1.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCO2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
85.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
84.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
75.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
70.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
69.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
66.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
62.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
62.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
58.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
58.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
57.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
57.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
57.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
56.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
55.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
54.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
54.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
54.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
52.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
50.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
50.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
49.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
48.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
48.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
48.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
47.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
47.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
47.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
46.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
45.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
43.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
43.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
43.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
42.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
41.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
41.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
41.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
40.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
40.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
40.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
39.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
39.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
38.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
38.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
37.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
37.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
37.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
37.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
37.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
36.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
36.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
36.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
36.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
36.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
35.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
35.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
35.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
34.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
34.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
34.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
33.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
33.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
33.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
33.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
32.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
31.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
31.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
31.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
31.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
30.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
30.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
30.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
30.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
30.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
29.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
28.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
27.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
27.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
27.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
26.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
26.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
26.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
26.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
25.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
25.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
25.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
24.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
24.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
24.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
24.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
24.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
23.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
23.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
22.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
21.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
21.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
20.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
20.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
19.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
17.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
16.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
16.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
12.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
9.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCO2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
68.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
62.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
55.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
50.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
47.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
45.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
43.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
35.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
32.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
32.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
27.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
24.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
18.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCO2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
120.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
114.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
97.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
88.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
82.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
81.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
77.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
70.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
68.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
67.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
63.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
61.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
60.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
60.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
59.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
58.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
58.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
56.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
56.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
56.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
55.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
54.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
54.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
54.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
54.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
52.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
51.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
51.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
50.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
50.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
50.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
49.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
49.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
48.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
48.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
48.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
47.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
47.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
47.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
47.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
47.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
47.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
46.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
46.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
46.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
46.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
46.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
46.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
46.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
46.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
46.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
46.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
45.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
45.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
44.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
44.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
44.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
44.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
43.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
42.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
42.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
42.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
42.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
41.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
41.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
41.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
40.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
40.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
40.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
40.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
40.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
39.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
39.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
39.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
39.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
39.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
39.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
39.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
39.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
39.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
38.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
38.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
38.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
38.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
37.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
37.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
37.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
36.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
35.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
34.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
34.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
34.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
34.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
34.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
33.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
33.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
33.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
33.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
33.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
33.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
33.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
33.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
32.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
32.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
32.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
31.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
30.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
30.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
30.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
30.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
30.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
27.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
27.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
26.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
25.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
24.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
24.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
21.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
20.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
19.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
19.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
18.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
13.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
10.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.0
CPT0088550004
Tumor
1.0
CPT0017410003
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0012550003
Tumor
0.9
CPT0001540009
Tumor
0.9
CPT0010110003
Tumor
0.8
CPT0024670003
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0081880003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0025290003
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0007320003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0065810003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0086820003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0025110003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0092730003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0069160003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0066480003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0002270011
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0025170003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0014350001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0092790003
Tumor
-0.4
CPT0089040001
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0078930003
Tumor
-0.4
CPT0086890003
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0010120001
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0092310003
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0066470004
Tumor
-0.6
CPT0078530001
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0088920001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0006530001
Normal
-0.6
CPT0081620001
Normal
-0.6
CPT0079430001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0006730001
Normal
-0.7
CPT0007470001
Normal
-0.7
CPT0001550001
Normal
-0.7
CPT0011410003
Tumor
-0.7
CPT0006950001
Normal
-0.7
CPT0078840001
Normal
-0.7
CPT0065820001
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0001270001
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0088710001
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0024680001
Normal
-0.7
CPT0069010001
Normal
-0.7
CPT0079000001
Normal
-0.7
CPT0088500001
Normal
-0.8
CPT0063640001
Normal
-0.8
CPT0001230001
Normal
-0.8
CPT0092800003
Normal
-0.8
CPT0078670001
Normal
-0.8
CPT0019160001
Normal
-0.8
CPT0000790001
Normal
-0.8
CPT0025920001
Normal
-0.9
CPT0012920003
Normal
-0.9
CPT0018250001
Normal
-0.9
CPT0088970003
Tumor
-0.9
CPT0001510001
Normal
-0.9
CPT0026420001
Normal
-1.0
CPT0089480003
Normal
-1.0
CPT0088640003
Normal
-1.0
CPT0020130001
Normal
-1.0
CPT0009020003
Normal
-1.0
CPT0066430001
Normal
-1.0
CPT0020020001
Normal
-1.0
CPT0078940001
Normal
-1.0
CPT0079300001
Normal
-1.0
CPT0000660001
Normal
-1.1
CPT0007870001
Normal
-1.1
CPT0002370001
Normal
-1.1
CPT0086370003
Normal
-1.1
CPT0077140001
Normal
-1.1
CPT0012640003
Normal
-1.1
CPT0009080003
Normal
-1.1
CPT0012770003
Normal
-1.2
CPT0012570003
Normal
-1.3
CPT0079510001
Normal
-1.3
CPT0079180003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
