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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
36.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
34.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
15.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
13.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
63.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
25.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
24.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
21.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
20.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
16.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
16.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
13.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
11.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
11.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
10.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
9.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
9.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
9.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
8.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
7.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
7.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
7.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
6.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
6.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
6.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
6.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
5.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
5.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
5.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
4.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
4.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
4.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
2.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
0.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
22.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
16.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
12.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
10.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
9.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
8.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
8.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
7.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
7.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
6.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
6.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
6.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
6.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
5.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PCGF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
72.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
69.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
63.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
57.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
50.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
49.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
47.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
46.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
44.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
44.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
42.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
41.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
39.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
38.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
38.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
38.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
38.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
36.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
33.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
32.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
30.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
30.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
29.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
29.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
28.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
27.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
26.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
25.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
25.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
25.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
22.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
21.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
18.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
15.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
13.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
11.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
9.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
9.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
8.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
3.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0085670003
Tumor
0.7
CPT0066470004
Tumor
0.6
CPT0015910003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0079230003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0007870001
Normal
0.4
CPT0079300001
Normal
0.4
CPT0000780007
Tumor
0.4
CPT0024680001
Normal
0.4
CPT0012080003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0088900003
Tumor
0.3
CPT0069010001
Normal
0.3
CPT0011240003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0075170001
Normal
0.3
CPT0078510003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0009020003
Normal
0.3
CPT0089020003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0088970003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0079430001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0086030003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0014130001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0021240003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0019130003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0069000003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0001220008
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0084560003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0014160003
Tumor
-0.5
CPT0001340003
Tumor
-0.6
CPT0023350003
Tumor
-0.7
CPT0007320003
Tumor
-0.7
CPT0086820003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0001500009
Tumor
-0.8
CPT0076330003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
