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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL15 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
461.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
307.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
303.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
301.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
266.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
209.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
207.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
204.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
196.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
178.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
177.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
167.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
163.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
158.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
157.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
146.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
144.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
144.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
143.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
140.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
140.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
139.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
138.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
135.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
134.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
134.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
132.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
132.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
132.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
130.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
129.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
127.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
127.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
124.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
123.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
122.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
120.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
117.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
117.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
108.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
107.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
107.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
107.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
104.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
103.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
101.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
100.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
100.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
100.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
99.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
98.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
98.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
98.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
98.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
92.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
92.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
91.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
91.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
91.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
91.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
90.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
90.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
89.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
89.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
89.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
88.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
88.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
87.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
86.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
86.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
85.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
85.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
84.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
84.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
83.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
83.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
83.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
83.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
81.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
80.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
80.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
80.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
79.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
79.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
79.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
78.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
78.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
78.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
77.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
73.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
73.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
72.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
72.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
72.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
71.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
71.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
71.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
71.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
70.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
70.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
70.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
69.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
69.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
68.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
67.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
67.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
67.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
67.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
66.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
66.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
66.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
65.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
65.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
63.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
63.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
62.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
61.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
60.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
60.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
59.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
59.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
58.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
58.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
58.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
58.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
57.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
57.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
56.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
55.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
55.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
55.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
55.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
55.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
55.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
54.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
54.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
53.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
53.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
53.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
53.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
53.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
52.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
51.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
51.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
50.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
50.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
50.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
49.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
49.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
49.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
49.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
48.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
48.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
48.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
47.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
47.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
46.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
45.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
45.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
44.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
44.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
44.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
43.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
43.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
43.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
42.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
42.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
42.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
42.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
42.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
42.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
41.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
40.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
40.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
40.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
40.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
40.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
39.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
39.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
39.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
38.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
38.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
38.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
38.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
37.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
37.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
36.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
36.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
35.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
35.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
35.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
35.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
34.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
34.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
34.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
34.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
34.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
33.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
33.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
33.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
33.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
32.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
32.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
32.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
31.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
31.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
31.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
31.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
31.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
31.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
31.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
31.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
31.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
30.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
29.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
29.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
29.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
28.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
28.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
28.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
28.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
28.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
27.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
27.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
27.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
26.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
26.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
25.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
24.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
23.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
23.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
23.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
23.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
23.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
23.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
23.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
22.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
22.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
22.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
22.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
21.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
20.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
20.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
19.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
19.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
18.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
18.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
18.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
17.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
17.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
17.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
16.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
14.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
14.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
14.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
12.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
12.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
12.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
9.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
3.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
0.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL15 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.6
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
230.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
186.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
160.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
159.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
152.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
144.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
132.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
115.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
113.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
109.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
105.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
105.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
96.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
95.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
94.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
93.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
92.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
91.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
89.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
85.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
85.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
84.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
83.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
81.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
80.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
80.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
79.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
79.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
79.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
76.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
75.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
75.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
74.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
74.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
74.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
73.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
72.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
71.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
70.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
69.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
69.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
69.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
66.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
66.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
65.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
64.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
64.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
64.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
62.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
61.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
61.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
61.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
60.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
59.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
58.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
58.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
58.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
57.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
57.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
56.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
56.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
55.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
55.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
54.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
54.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
54.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
53.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
53.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
53.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
52.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
52.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
50.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
50.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
49.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
47.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
47.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
46.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
45.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
44.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
44.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
44.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
44.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
43.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
43.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
43.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
42.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
42.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
42.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
42.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
42.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
41.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
41.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
41.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
41.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
41.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
40.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
40.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
40.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
40.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
40.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
39.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
39.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
38.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
38.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
38.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
38.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
38.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
38.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
38.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
38.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
38.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
38.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
38.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
38.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
37.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
36.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
36.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
36.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
34.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
34.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
34.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
33.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
33.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
32.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
32.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
32.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
32.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
31.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
31.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
31.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
30.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
30.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
29.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
29.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
29.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
29.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
29.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
29.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
29.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
29.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
28.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
28.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
28.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
28.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
27.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
27.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
26.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
26.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
25.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
25.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
25.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
25.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
24.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
24.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
24.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
24.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
23.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
23.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
23.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
23.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
22.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
21.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
20.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
20.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
19.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
19.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
19.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
18.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
17.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
17.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
17.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
15.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
2.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
1.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.