BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.0 nTPM
HPA Brain:0.5 nTPM
GTEx:0.0 nTPM
Pig:5.2 nTPM
Mouse:0.1 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi 0.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.5
1781 Male, age 74, unknown 0.8
2289 Male, age 61, right hemisphere 0.8
2290 Female, age 72, unknown 0.7
1854 Male, age 80, left hemisphere 0.5
2288 Male, age 75, left hemisphere 0.5
1857 Female, age 85, left hemisphere 0.4
2846 Female, age 79, unknown 0.4
2481 Female, age 94, left hemisphere 0.0
Globus pallidus, externus
nTPM: 0.4
2646 Male, age 61, right hemisphere 0.6
2567 Female, age 72, unknown 0.4
2772 Female, age 79, unknown 0.4
2395 Male, age 75, both hemispheres 0.3
1996 Male, age 80, right hemisphere 0.2
Globus pallidus, internus
nTPM: 0.4
2111 Female, age 85, right hemisphere 0.5
2483 Female, age 94, right hemisphere 0.5
2778 Female, age 91, both hemispheres 0.5
2566 Female, age 72, unknown 0.4
1818 Male, age 74, unknown 0.3
2287 Male, age 75, right hemisphere 0.2
2037 Male, age 80, right hemisphere 0.1
Nucleus accumbens
nTPM: 0.3
2732 Male, age 80, right hemisphere 0.5
1806 Female, age 85, left hemisphere 0.4
1783 Male, age 74, unknown 0.3
1856 Female, age 91, right hemisphere 0.2
2286 Male, age 75, left hemisphere 0.2
2391 Female, age 94, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
2824 Male, age 61, right hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.4
2484 Female, age 94, left hemisphere 0.8
2569 Male, age 61, both hemispheres 0.5
2393 Male, age 80, right hemisphere 0.3
2821 Male, age 75, both hemispheres 0.2
Nucleus of the diagonal band
nTPM: 0.2
1979 Male, age 74, unknown 0.3
2195 Female, age 85, both hemispheres 0.3
2775 Male, age 80, right hemisphere 0.3
1812 Female, age 91, both hemispheres 0.2
2029 Male, age 61, right hemisphere 0.1
Putamen
nTPM: 0.5
2647 Male, age 75, left hemisphere 0.9
2466 Female, age 79, unknown 0.6
2489 Female, age 72, unknown 0.5
1829 Male, age 74, unknown 0.4
1937 Female, age 91, right hemisphere 0.4
1838 Male, age 80, right hemisphere 0.3
2482 Female, age 94, left hemisphere 0.1
Septal nuclei
nTPM: 0.2
2059 Female, age 85, both hemispheres 0.5
1960 Male, age 74, unknown 0.3
2199 Male, age 80, right hemisphere 0.3
2031 Female, age 72, unknown 0.2
2009 Female, age 91, both hemispheres 0.1
2394 Male, age 61, left hemisphere 0.0
2629 Female, age 94, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.3
1974 Female, age 91, both hemispheres 0.4
2201 Male, age 74, unknown 0.4
2486 Female, age 94, both hemispheres 0.1

BASAL GANGLIA - GTEx RNA-seqi
Max subtype nTPMi 0.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.0
Samples: 246

Max nTPM: 0.2
Min nTPM: 0.0
Std nTPM: 0.0
Median nTPM: 0.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 0.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 0.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 0.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 0.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 0.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 0.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 0.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 0.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 0.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 0.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 0.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.0
Samples: 246

Max nTPM: 0.4
Min nTPM: 0.0
Std nTPM: 0.0
Median nTPM: 0.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 0.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 0.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 0.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 0.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 0.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 0.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 0.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 0.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 0.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 0.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 0.1
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Brain - Putamen (basal ganglia)
Average nTPM: 0.0
Samples: 205

Max nTPM: 0.2
Min nTPM: 0.0
Std nTPM: 0.0
Median nTPM: 0.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 0.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 0.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 0.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 0.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 0.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 0.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 0.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 0.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 0.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 0.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 0.1
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BASAL GANGLIA - Pig RNA-seqi
Max subtype nTPMi 5.2
Pig sample Sample description nTPM
Caudate
nTPM: 4.8
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.9
Sample A Female 5.2
Sample B Female 5.2
Sample C Male 3.9
Sample D Male 5.0
Putamen
nTPM: 5.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.6
Sample A Female 6.5
Sample B Female 4.6
Sample C Male 3.6
Sample D Male 5.1
Septum
nTPM: 5.2
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.4
Sample A Female 4.4
Sample B Female 4.6
Sample C Male 4.5
Sample D Male 7.2
Ventral pallidum
nTPM: 5.2
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.3
Sample A Female 4.8
Sample B Female 4.3
Sample C Male 5.2
Sample D Male 6.6

BASAL GANGLIA - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.2
Septum
nTPM: 0.2
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.6
Sample D Female 0.0
Ventral forebrain
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

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