HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:61.2 nTPM
HPA Brain:37.4 nTPM
GTEx:61.2 nTPM
FANTOM5:182.3 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:222.7 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059251Antibody HPA071866
Glial cells LowLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.7
1898 Male, age 80, left hemisphere 35.7
1911 Female, age 85, right hemisphere 35.2
2529 Female, age 94, left hemisphere 34.2
2621 Female, age 67, right hemisphere 31.6
1855 Male, age 76, left hemisphere 27.0
2148 Female, age 91, left hemisphere 26.6
Dentate gyrus
nTPM: 34.5
2246 Female, age 85, both hemispheres 41.1
2010 Male, age 76, both hemispheres 35.5
1927 Female, age 91, both hemispheres 34.8
2530 Female, age 94, left hemisphere 34.6
2528 Male, age 74, both hemispheres 31.7
2531 Female, age 67, both hemispheres 29.6
Entorhinal gyrus
nTPM: 29.9
2117 Female, age 91, right hemisphere 34.4
2764 Male, age 80, right hemisphere 34.1
1787 Male, age 76, left hemisphere 31.7
1938 Female, age 85, left hemisphere 31.7
2686 Male, age 75, right hemisphere 24.7
2613 Female, age 94, left hemisphere 22.5
Hippocampus, CA1
nTPM: 37.4
2749 Male, age 80, left hemisphere 48.7
2527 Male, age 74, both hemispheres 38.8
2082 Female, age 91, right hemisphere 34.6
2045 Male, age 76, both hemispheres 34.4
1873 Female, age 85, both hemispheres 30.6
Hippocampus, CA2
nTPM: 35.5
2249 Male, age 74, both hemispheres 42.9
2437 Female, age 94, left hemisphere 38.2
1963 Male, age 80, left hemisphere 34.4
2113 Female, age 91, right hemisphere 34.4
1892 Male, age 76, both hemispheres 32.4
1940 Female, age 85, left hemisphere 30.5
Hippocampus, CA3
nTPM: 34.0
2436 Male, age 74, both hemispheres 44.6
2137 Male, age 80, left hemisphere 36.6
2620 Female, age 94, left hemisphere 33.5
1867 Male, age 76, both hemispheres 29.9
1891 Female, age 85, both hemispheres 29.9
2861 Female, age 67, both hemispheres 29.8
Parahippocampal cortex
nTPM: 32.6
2250 Female, age 67, right hemisphere 40.9
2532 Female, age 72, left hemisphere 35.2
1990 Female, age 91, right hemisphere 33.2
1933 Female, age 85, both hemispheres 32.9
2245 Female, age 91, both hemispheres 32.9
1850 Male, age 80, both hemispheres 32.2
2018 Male, age 76, both hemispheres 31.9
2622 Female, age 67, right hemisphere 30.1
2692 Male, age 74, both hemispheres 29.1
2693 Female, age 94, both hemispheres 27.5
Perirhinal gyrus
nTPM: 36.0
1794 Male, age 80, right hemisphere 43.5
1847 Female, age 91, left hemisphere 39.8
2521 Female, age 94, right hemisphere 32.8
1841 Female, age 85, right hemisphere 32.4
2848 Male, age 76, right hemisphere 31.5
Subiculum
nTPM: 32.6
1977 Female, age 85, both hemispheres 34.5
2619 Male, age 74, both hemispheres 34.5
2438 Female, age 94, left hemisphere 34.1
1901 Male, age 80, both hemispheres 32.9
2042 Male, age 76, both hemispheres 32.1
2729 Female, age 91, right hemisphere 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.2
Samples: 197

Max nTPM: 159.4
Min nTPM: 21.5
Std nTPM: 20.4
Median nTPM: 58.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 159.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 141.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 124.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 115.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 111.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 111.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 110.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 108.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 105.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 103.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 96.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 182.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.3
FF:10169-103B7 60 years, female 252.3
FF:10153-102I9 76 years, female 112.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 21.2
Sample A Female 26.9
Sample B Female 23.4
Sample C Male 23.0
Sample D Male 21.2
Dorsal hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.4
Sample A Female 30.0
Sample B Female 25.0
Sample C Male 24.7
Sample D Male 21.4
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 25.9
Min nTPM: 22.0
Sample A Female 25.9
Sample B Female 24.5
Sample C Male 23.2
Sample D Male 22.0
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 28.2
Min nTPM: 21.2
Sample A Female 24.2
Sample B Female 21.2
Sample C Male 28.2
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 222.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 206.7
Samples: 4

Max nTPM: 226.5
Min nTPM: 185.7
Sample A Male 198.5
Sample B Male 226.5
Sample C Female 216.0
Sample D Female 185.7
Hippocampal formation
nTPM: 222.8
Samples: 4

Max nTPM: 256.2
Min nTPM: 189.7
Sample A Male 256.2
Sample B Male 189.7
Sample C Female 197.5
Sample D Female 247.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69838286 Antisense, RP_050301_01_C12, Mouse strain C57BL/6J (56 days, male) 3.1

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