Expression of UPK3BL1 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

UPK3BL1 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 52.99

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

152.6

Number of samples

492

Samples

Sample	Description	TPM
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	2124.8
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	2100.2
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	1646.5
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	1422.6
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	1039.3
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	925.5
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	864.0
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	855.9
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	844.4
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	823.5
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	790.5
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	777.9
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	773.9
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	767.0
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	700.1
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	694.5
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	677.7
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	662.6
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	621.9
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	598.9
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	591.1
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	557.3
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	550.7
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	540.4
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	538.3
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	533.7
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	530.9
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	510.2
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	501.2
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	489.7
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	473.1
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	471.3
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	470.4
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	465.0
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	463.8
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	452.9
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	449.7
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	448.7
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	439.8
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	433.1
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	425.3
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	401.2
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	400.8
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	399.1
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	398.4
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	389.8
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	387.5
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	378.1
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	377.8
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	371.6
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	371.3
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	371.0
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	366.4
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	361.4
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	349.1
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	345.5
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	345.0
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	333.2
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	328.0
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	327.1
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	326.8
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	321.2
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	320.3
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	312.5
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	306.6
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	303.7
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	303.5
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	302.7
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	300.2
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	298.5
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	296.4
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	291.6
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	289.9
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	286.7
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	281.6
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	278.1
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	278.0
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	277.8
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	277.8
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	274.1
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	272.6
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	271.2
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	266.9
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	260.8
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	259.0
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	258.1
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	257.0
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	256.6
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	253.9
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	248.1
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	247.9
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	245.1
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	243.4
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	240.6
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	236.4
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	234.0
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	232.0
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	230.7
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	224.5
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	221.9
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	220.7
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	217.2
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	214.2
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	213.6
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	212.0
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	210.4
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	209.6
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	209.6
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	209.6
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	209.0
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	201.9
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	201.3
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	200.5
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	200.1
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	196.3
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	193.2
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	190.1
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	187.9
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	186.4
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	186.1
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	183.8
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	183.1
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	182.0
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	179.8
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	178.0
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	176.4
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	175.0
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	174.2
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	171.7
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	170.0
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	169.6
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	168.4
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	168.3
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	168.1
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	167.3
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	164.6
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	163.9
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	163.6
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	163.6
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	162.8
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	162.5
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	161.1
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	158.3
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	157.7
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	155.8
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	155.0
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	154.1
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	153.8
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	153.7
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	153.4
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	152.5
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	149.4
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	147.9
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	146.4
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	146.2
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	145.9
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	144.5
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	142.5
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	141.6
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	140.8
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	139.6
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	136.9
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	134.1
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	133.3
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	132.5
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	131.8
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	131.6
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	131.4
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	129.7
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	128.1
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	126.8
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	126.3
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	124.2
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	123.5
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	123.3
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	119.5
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	119.0
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	117.9
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	116.9
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	116.0
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	115.8
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	115.3
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	115.2
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	115.2
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	114.2
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	113.3
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	113.1
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	112.2
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	109.4
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	106.7
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	106.5
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	105.6
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	104.9
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	104.2
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	103.7
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	103.1
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	103.0
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	102.6
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	102.0
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	101.7
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	101.4
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	99.1
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	98.4
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	98.4
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	97.8
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	97.2
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	96.5
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	96.3
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	95.5
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	95.5
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	93.4
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	93.4
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	93.2
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	93.2
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	92.7
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	91.6
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	90.8
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	90.7
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	89.4
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	89.4
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	89.1
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	88.7
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	88.2
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	86.5
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	86.1
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	86.1
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	83.6
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	83.5
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	83.4
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	83.2
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	82.6
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	81.3
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	80.6
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	80.4
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	80.1
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	79.7
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	79.6
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	79.5
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	79.1
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	77.6
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	77.1
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	77.1
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	74.9
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	74.5
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	72.7
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	72.6
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	72.1
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	71.8
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	70.8
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	70.7
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	70.5
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	70.1
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	70.1
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	69.9
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	69.9
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	69.2
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	68.9
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	68.0
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	67.6
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	67.4
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	67.4
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	66.4
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	64.7
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	64.6
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	63.7
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	63.6
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	62.4
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	61.3
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	60.9
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	60.6
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	60.5
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	60.0
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	60.0
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	60.0
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	59.3
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	59.2
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	59.1
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	58.4
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	58.2
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	57.5
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	56.8
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	56.8
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	56.7
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	56.2
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	56.0
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	55.6
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	55.5
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	55.4
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	54.9
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	54.6
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	54.1
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	53.7
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	53.3
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	52.7
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	52.0
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	52.0
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	51.6
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	51.1
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	50.9
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	50.7
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	49.2
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	48.8
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	48.2
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	47.7
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	47.1
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	46.6
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	46.4
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	46.3
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	45.8
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	45.3
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	44.8
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	44.6
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	43.9
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	43.2
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	43.1
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	43.0
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	42.9
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	42.0
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	42.0
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	42.0
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	41.8
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	41.1
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	40.7
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	40.4
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	40.2
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	40.2
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	40.0
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	39.7
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	39.6
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	39.3
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	39.1
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	39.0
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	38.6
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	38.5
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	38.3
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	37.7
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	37.6
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	37.2
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	36.9
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	36.7
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	35.8
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	34.9
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	34.8
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	34.7
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	34.7
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	34.4
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	34.4
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	33.7
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	33.6
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	33.6
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	33.5
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	33.3
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	33.1
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	32.8
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	32.7
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	32.1
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	31.8
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	31.6
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	31.4
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	30.6
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	30.6
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	30.3
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	30.2
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	30.2
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	30.1
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	30.0
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	30.0
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	29.3
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	29.2
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	29.2
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	29.1
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	29.0
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	28.9
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	28.2
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	28.1
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	27.9
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	27.6
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	27.6
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	27.5
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	27.3
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	27.3
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	26.9
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	26.5
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	25.2
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	25.1
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	24.9
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	24.4
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	24.3
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	24.2
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	23.9
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	23.8
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	23.7
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	23.7
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	23.2
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	23.2
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	23.0
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	22.9
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	22.9
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	22.8
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	22.5
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	22.3
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	22.3
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	22.2
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	22.1
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	22.1
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	21.5
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	21.4
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	21.3
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	21.2
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	21.2
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	21.1
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	20.5
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	20.5
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	20.3
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	19.8
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	19.6
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	19.6
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	19.1
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	18.9
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	18.8
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	17.9
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	17.8
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	17.7
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	17.5
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	17.5
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	17.2
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	17.1
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	17.0
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	16.9
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	16.8
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	16.7
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	16.7
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	16.7
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	16.6
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	16.6
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	16.5
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	16.4
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	16.3
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	15.9
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	15.8
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	15.4
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	15.3
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	15.0
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	14.8
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	14.5
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	14.3
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	14.0
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	13.4
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	13.3
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	13.1
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	13.1
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	12.6
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	12.5
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	12.5
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	12.2
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	11.7
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	11.6
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	11.6
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	11.4
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	11.4
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	10.4
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	10.2
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	9.8
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	9.8
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	9.3
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	9.3
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	9.3
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	8.7
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	8.4
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	8.2
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	8.0
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	7.9
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	7.9
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	7.8
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	7.5
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	7.3
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	6.7
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	6.3
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	6.1
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	6.0
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	5.6
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	5.4
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	5.2
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	5.1
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	5.0
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	4.8
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	4.6
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	4.5
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	4.3
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	4.2
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	3.8
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	2.3
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0245630003	Tumor	3.3
CPT0226340003	Tumor	2.7
CPT0248350003	Normal	2.6
CPT0223970003	Tumor	2.4
CPT0013130003	Tumor	2.2
CPT0235910003	Tumor	2.1
C3N-01620-05	Normal	1.9
CPT0237620004	Tumor	1.9
CPT0195860003	Tumor	1.7
C3N-02693-06	Normal	1.6
CPT0245300003	Tumor	1.5
CPT0163610003	Normal	1.5
CPT0163170003	Normal	1.3
CPT0237150003	Normal	1.3
CPT0163800003	Normal	1.2
CPT0163860003	Normal	1.2
C3N-04275-05	Normal	1.1
CPT0226270003	Normal	1.1
CPT0242000004	Normal	1.1
CPT0226350003	Normal	1.0
CPT0163430003	Normal	1.0
CPT0245560003	Normal	0.9
CPT0163250003	Normal	0.9
CPT0194260003	Normal	0.9
CPT0088080003	Normal	0.9
CPT0190850003	Tumor	0.8
CPT0237640003	Normal	0.8
CPT0226400003	Normal	0.7
CPT0245130003	Tumor	0.7
CPT0190860003	Normal	0.6
CPT0088430003	Normal	0.6
CPT0278700002	Normal	0.5
CPT0196210003	Tumor	0.5
CPT0094490004	Tumor	0.4
CPT0177710003	Tumor	0.4
CPT0245180003	Tumor	0.4
CPT0201860004	Normal	0.4
CPT0245410003	Normal	0.4
C3N-04276-06	Normal	0.4
CPT0087990003	Tumor	0.3
CPT0094580003	Normal	0.3
CPT0237500003	Normal	0.3
CPT0220610003	Tumor	0.3
CPT0223450003	Tumor	0.3
CPT0162890003	Tumor	0.2
CPT0245400003	Tumor	0.2
CPT0088010003	Normal	0.2
CPT0084650004	Normal	0.1
CPT0226090003	Normal	0.1
C3N-00857-05	Normal	0.1
CPT0196060003	Normal	0.0
CPT0245460003	Normal	0.0
CPT0222200003	Normal	0.0
CPT0245190003	Normal	0.0
CPT0163410003	Tumor	0.0
C3N-04279-05	Normal	0.0
CPT0163240003	Tumor	0.0
CPT0199710003	Normal	-0.1
CPT0244940004	Tumor	-0.1
CPT0229220002	Normal	-0.1
CPT0243140004	Normal	-0.1
CPT0244890004	Tumor	-0.1
CPT0201830004	Tumor	-0.1
CPT0163740003	Tumor	-0.2
CPT0013460003	Normal	-0.2
CPT0194790003	Tumor	-0.3
CPT0169920003	Normal	-0.3
CPT0236870003	Normal	-0.3
CPT0088060004	Tumor	-0.3
CPT0235920003	Normal	-0.3
CPT0011130005	Tumor	-0.4
CPT0245020003	Normal	-0.4
CPT0245680003	Tumor	-0.4
CPT0222180003	Tumor	-0.4
CPT0013000004	Tumor	-0.4
CPT0199830003	Normal	-0.4
CPT0095040003	Tumor	-0.4
C3N-01859-04	Normal	-0.5
CPT0169890003	Tumor	-0.6
CPT0223460003	Normal	-0.6
CPT0195880003	Normal	-0.6
CPT0226440003	Tumor	-0.6
CPT0196040003	Tumor	-0.6
CPT0013430003	Tumor	-0.6
CPT0162940003	Tumor	-0.6
CPT0094420004	Tumor	-0.7
CPT0194250003	Tumor	-0.7
C3N-00295-05	Normal	-0.7
CPT0241980004	Tumor	-0.7
CPT0013250003	Normal	-0.7
CPT0245730003	Tumor	-0.8
CPT0011320003	Normal	-0.8
CPT0248330003	Tumor	-0.8
CPT0163530003	Tumor	-0.8
CPT0261520003	Tumor	-0.8
CPT0177010003	Tumor	-0.8
CPT0236850004	Tumor	-0.9
CPT0163720003	Normal	-0.9
C3N-01758-04	Normal	-0.9
CPT0163790003	Tumor	-0.9
CPT0163020003	Normal	-0.9
CPT0177390003	Tumor	-0.9
CPT0226450003	Normal	-1.0
CPT0220620003	Normal	-1.0
CPT0243090003	Tumor	-1.0
CPT0246670003	Tumor	-1.0
CPT0163910003	Tumor	-1.0
CPT0184530003	Tumor	-1.0
CPT0088410003	Tumor	-1.0
CPT0207870004	Tumor	-1.0
CPT0008960003	Normal	-1.0
CPT0123280003	Normal	-1.1
CPT0163600003	Tumor	-1.1
CPT0195700003	Normal	-1.1
CPT0169740004	Normal	-1.1
CPT0226030003	Tumor	-1.1
CPT0194420003	Tumor	-1.1
CPT0163340003	Tumor	-1.1
CPT0163160003	Tumor	-1.1
CPT0245060004	Tumor	-1.2
CPT0177220003	Normal	-1.2
CPT0195680003	Tumor	-1.2
CPT0094560004	Tumor	-1.2
CPT0169640003	Tumor	-1.2
CPT0123190003	Normal	-1.2
CPT0236640003	Normal	-1.2
CPT0226130003	Tumor	-1.2
CPT0008930003	Tumor	-1.2
CPT0237480004	Tumor	-1.3
CPT0226390003	Tumor	-1.3
CPT0194800003	Normal	-1.3
CPT0123260003	Tumor	-1.3
CPT0084630009	Tumor	-1.3
CPT0248520003	Tumor	-1.3
CPT0163650003	Tumor	-1.3
CPT0236620003	Tumor	-1.3
CPT0199700003	Tumor	-1.4
CPT0169730003	Tumor	-1.4
CPT0246590003	Tumor	-1.4
CPT0245500003	Tumor	-1.4
CPT0123180003	Tumor	-1.5
CPT0008520008	Tumor	-1.5
CPT0222360003	Tumor	-1.5
CPT0162990004	Tumor	-1.5
CPT0245230004	Tumor	-1.6
CPT0237130004	Tumor	-1.6
CPT0013030003	Normal	-1.6
CPT0199890003	Normal	-1.6
CPT0094350004	Tumor	-1.7
CPT0087820003	Tumor	-1.8
CPT0245550003	Tumor	-1.8
CPT0176770003	Tumor	-1.8
CPT0127050003	Tumor	-1.9
CPT0011290003	Tumor	-1.9
CPT0246540003	Tumor	-1.9
CPT0245600003	Tumor	-2.0
CPT0013210004	Tumor	-2.0
CPT0226250004	Tumor	-2.0
CPT0163490003	Normal	-2.0
CPT0094280004	Tumor	-2.1
CPT0281470002	Normal	-2.1
CPT0256560003	Tumor	-2.2
CPT0245140003	Normal	-2.2
CPT0199820003	Tumor	-2.2
CPT0008630003	Tumor	-2.3
CPT0163840003	Tumor	-2.3
CPT0177200003	Tumor	-2.4
CPT0194960003	Tumor	-2.4
CPT0163480003	Tumor	-2.5
CPT0245350003	Tumor	-2.5
CPT0199880003	Tumor	-2.5
CPT0163090003	Tumor	-2.7
CPT0250310003	Tumor	-2.7
CPT0245450003	Tumor	-2.7
CPT0245010003	Tumor	-2.8
CPT0024810003	Tumor	-2.8
CPT0246620003	Tumor	-3.0
CPT0235460003	Tumor	-3.2
CPT0235470002	Normal	-3.5
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA011403
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Squamous cell carcinoma, NOS Squamous cell carcinoma, metastatic, NOS
Adenocarcinoma, NOS Adenoma, NOS
Adenocarcinoma, NOS