HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		117.828
Protein expressioni No data
RNA expressioni
Consensus:12.0 nTPM
HPA Brain:24.4 nTPM
GTEx:12.0 nTPM
FANTOM5:95.6 Scaled Tags Per Million
Pig:84.5 nTPM
Mouse:31.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079017
Hippocampal formation mean intensity 117.828
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 80.081
Molecular layer of the dentate gyrus 75.709
Granular dentate gyrus 90.792
CA1 - oriens layer 81.479
CA1 - pyramidal layer 102.716
CA1 - radiatum layer 87.909
CA2 - oriens layer 81.497
CA2 - pyramidal layer 99.609
CA2 - radiatum layer 88.357
CA3 - oriens layer 105.774
CA3 - pyramidal layer 100.789
CA3 - radiatum layer 89.029
Stratum lucidum 87.916
Lacunosum moleculare 76.043
Subiculum 80.846

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
1898 Male, age 80, left hemisphere 23.9
1911 Female, age 85, right hemisphere 21.9
2529 Female, age 94, left hemisphere 21.5
1855 Male, age 76, left hemisphere 20.5
2148 Female, age 91, left hemisphere 20.1
2621 Female, age 67, right hemisphere 19.9
Dentate gyrus
nTPM: 21.9
2010 Male, age 76, both hemispheres 23.4
1927 Female, age 91, both hemispheres 22.6
2528 Male, age 74, both hemispheres 22.1
2246 Female, age 85, both hemispheres 21.6
2530 Female, age 94, left hemisphere 21.6
2531 Female, age 67, both hemispheres 19.8
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 24.2
2117 Female, age 91, right hemisphere 22.6
2764 Male, age 80, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.6
2686 Male, age 75, right hemisphere 18.9
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 26.2
1873 Female, age 85, both hemispheres 24.2
2527 Male, age 74, both hemispheres 21.8
2045 Male, age 76, both hemispheres 20.8
2082 Female, age 91, right hemisphere 20.0
Hippocampus, CA2
nTPM: 22.3
2249 Male, age 74, both hemispheres 25.1
1940 Female, age 85, left hemisphere 23.5
1963 Male, age 80, left hemisphere 22.4
2113 Female, age 91, right hemisphere 21.1
1892 Male, age 76, both hemispheres 20.7
2437 Female, age 94, left hemisphere 20.7
Hippocampus, CA3
nTPM: 21.6
2436 Male, age 74, both hemispheres 24.1
1891 Female, age 85, both hemispheres 23.2
2137 Male, age 80, left hemisphere 22.9
1867 Male, age 76, both hemispheres 22.1
2620 Female, age 94, left hemisphere 20.5
2861 Female, age 67, both hemispheres 17.0
Parahippocampal cortex
nTPM: 22.5
1850 Male, age 80, both hemispheres 26.5
1933 Female, age 85, both hemispheres 23.9
2693 Female, age 94, both hemispheres 23.8
2250 Female, age 67, right hemisphere 22.8
2245 Female, age 91, both hemispheres 22.5
1990 Female, age 91, right hemisphere 22.3
2692 Male, age 74, both hemispheres 21.8
2532 Female, age 72, left hemisphere 21.5
2018 Male, age 76, both hemispheres 21.2
2622 Female, age 67, right hemisphere 18.6
Perirhinal gyrus
nTPM: 24.4
1841 Female, age 85, right hemisphere 27.5
1794 Male, age 80, right hemisphere 25.1
1847 Female, age 91, left hemisphere 23.7
2848 Male, age 76, right hemisphere 23.5
2521 Female, age 94, right hemisphere 22.0
Subiculum
nTPM: 22.4
2438 Female, age 94, left hemisphere 23.7
2729 Female, age 91, right hemisphere 22.9
1901 Male, age 80, both hemispheres 22.5
1977 Female, age 85, both hemispheres 22.5
2042 Male, age 76, both hemispheres 22.4
2619 Male, age 74, both hemispheres 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.0
Samples: 197

Max nTPM: 17.6
Min nTPM: 9.3
Std nTPM: 1.5
Median nTPM: 11.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 17.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 16.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 16.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 15.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.0
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 14.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 14.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 14.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 14.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 95.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.6
FF:10153-102I9 76 years, female 96.7
FF:10169-103B7 60 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 84.5
Pig sample Sample description nTPM
Subiculum
nTPM: 69.3
Samples: 4

Max nTPM: 83.3
Min nTPM: 63.9
Sample A Female 83.3
Sample B Female 63.9
Sample C Male 65.6
Sample D Male 64.5
Dorsal hippocampus
nTPM: 84.5
Samples: 4

Max nTPM: 100.6
Min nTPM: 72.3
Sample A Female 100.6
Sample B Female 84.4
Sample C Male 80.8
Sample D Male 72.3
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 75.5
Min nTPM: 59.1
Sample A Female 73.5
Sample B Female 75.5
Sample C Male 63.7
Sample D Male 59.1
Ventral hippocampus
nTPM: 74.9
Samples: 4

Max nTPM: 82.2
Min nTPM: 63.2
Sample A Female 79.6
Sample B Female 63.2
Sample C Male 74.7
Sample D Male 82.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 31.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 36.2
Min nTPM: 28.5
Sample A Male 30.4
Sample B Male 36.2
Sample C Female 28.5
Sample D Female 29.7
Hippocampal formation
nTPM: 31.5
Samples: 4

Max nTPM: 33.8
Min nTPM: 28.7
Sample A Male 33.8
Sample B Male 32.2
Sample C Female 31.1
Sample D Female 28.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69873481 Antisense, RP_050512_01_D03, Mouse strain C57BL/6J (56 days, male) 3.1

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