We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM8A is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
313.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
271.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
263.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
250.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
229.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
219.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
217.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
208.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
206.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
202.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
194.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
189.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
186.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
183.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
178.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
174.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
172.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
171.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
169.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
165.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
165.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
165.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
164.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
163.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
162.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
159.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
158.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
157.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
156.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
156.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
155.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
155.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
154.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
154.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
152.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
151.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
151.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
150.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
149.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
147.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
146.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
144.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
144.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
143.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
141.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
140.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
139.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
137.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
134.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
133.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
132.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
131.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
128.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
128.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
128.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
127.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
127.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
127.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
126.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
126.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
122.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
122.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
122.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
120.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
119.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
119.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
119.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
117.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
117.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
116.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
116.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
116.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
115.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
114.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
114.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
114.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
113.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
113.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
112.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
112.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
111.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
110.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
109.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
109.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
109.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
108.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
108.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
108.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
108.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
107.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
106.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
106.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
105.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
105.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
104.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
104.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
103.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
103.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
103.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
103.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
102.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
101.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
101.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
101.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
101.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
101.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
100.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
100.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
100.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
100.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
100.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
100.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
100.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
99.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
99.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
97.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
97.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
97.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
96.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
95.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
95.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
95.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
95.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
95.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
94.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
94.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
94.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
94.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
94.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
94.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
93.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
93.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
92.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
92.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
91.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
91.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
90.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
90.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
90.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
90.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
90.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
89.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
89.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
89.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
89.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
88.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
88.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
88.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
88.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
87.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
87.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
87.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
87.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
87.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
87.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
86.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
86.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
86.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
86.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
86.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
86.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
85.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
85.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
85.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
85.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
84.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
84.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
82.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
82.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
82.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
82.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
81.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
81.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
81.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
81.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
81.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
80.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
79.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
79.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
79.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
79.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
79.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
79.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
78.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
78.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
78.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
77.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
77.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
77.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
77.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
77.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
77.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
76.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
76.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
75.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
75.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
75.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
75.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
75.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
74.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
74.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
74.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
74.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
74.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
73.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
73.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
73.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
73.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
72.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
72.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
72.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
72.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
72.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
72.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
71.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
71.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
71.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
70.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
70.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
70.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
69.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
69.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
69.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
69.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
68.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
68.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
68.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
68.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
68.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
68.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
67.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
67.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
67.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
67.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
67.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
67.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
66.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
66.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
66.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
66.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
66.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
66.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
65.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
65.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
65.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
65.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
65.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
65.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
65.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
65.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
64.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
64.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
64.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
64.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
64.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
63.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
63.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
63.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
63.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
63.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
63.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
62.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
62.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
62.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
62.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
62.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
61.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
61.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
60.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
60.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
59.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
59.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
59.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
59.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
59.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
59.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
58.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
58.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
58.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
58.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
58.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
58.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
57.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
57.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
57.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
57.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
56.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
56.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
56.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
55.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
55.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
54.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
54.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
54.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
54.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
54.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
53.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
53.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
53.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
52.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
52.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
52.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
51.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
51.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
51.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
50.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
50.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
50.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
50.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
49.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
48.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
48.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
47.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
47.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
47.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
46.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
46.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
46.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
45.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
45.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
45.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
44.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
44.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
44.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
44.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
43.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
43.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
43.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
43.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
42.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
42.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
42.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
41.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
41.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
41.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
41.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
40.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
40.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
39.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
39.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
38.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
38.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
38.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
37.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
36.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
36.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
33.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
32.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
31.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
29.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
29.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
29.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
29.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
29.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
26.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
26.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM8A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.4
Number of samples
231
Samples
Sample
Description
TPM
DO23525
0 years, male, NA, stage:4, alive, 1050 days
47.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
46.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
44.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
39.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
38.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
37.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
37.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
37.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
33.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
33.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
32.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
31.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
31.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
31.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
31.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
31.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
30.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
30.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
30.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
29.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
28.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
28.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
28.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
28.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
27.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
27.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
26.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
26.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
25.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
25.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
25.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
25.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
25.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
24.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
24.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
24.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
24.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
24.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
24.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
24.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
24.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
23.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
23.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
23.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
22.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
22.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
22.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
21.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
21.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
21.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
21.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
21.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
21.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
20.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
19.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
19.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
19.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
19.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
19.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
19.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
19.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
18.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
18.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
18.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
18.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
17.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
17.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
17.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
17.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
17.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
17.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
16.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
16.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
16.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
16.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
16.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
16.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
15.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
15.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
15.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
15.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
14.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
14.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
14.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
14.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
13.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
13.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
13.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
13.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
12.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
12.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
11.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
11.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
10.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
647
Tumor
1.0
957
Tumor
1.0
411
Tumor
1.0
425
Tumor
0.9
865
Tumor
0.9
965
Tumor
0.8
743
Tumor
0.8
951
Tumor
0.7
413
Tumor
0.7
497
Tumor
0.7
1021
Tumor
0.7
357
Tumor
0.7
131
Tumor
0.7
977
Tumor
0.6
545
Tumor
0.6
355
Tumor
0.6
161
Tumor
0.6
351
Tumor
0.6
277
Tumor
0.6
331
Tumor
0.6
443
Tumor
0.6
112
Tumor
0.6
527
Tumor
0.5
463
Tumor
0.5
943
Tumor
0.5
213
Tumor
0.5
533
Tumor
0.5
313
Tumor
0.5
813
Tumor
0.5
777
Tumor
0.5
975
Tumor
0.5
571
Tumor
0.5
663
Tumor
0.4
661
Tumor
0.4
221
Tumor
0.4
967
Tumor
0.4
487
Tumor
0.4
724
Normal
0.4
1031
Tumor
0.4
431
Tumor
0.4
123
Tumor
0.4
271
Tumor
0.4
385
Tumor
0.4
467
Tumor
0.4
877
Tumor
0.4
573
Tumor
0.4
433
Tumor
0.3
727
Tumor
0.3
695
Tumor
0.3
477
Tumor
0.3
185
Tumor
0.3
881
Tumor
0.3
814
Normal
0.3
171
Tumor
0.3
211
Tumor
0.3
435
Tumor
0.3
953
Tumor
0.3
387
Tumor
0.3
483
Tumor
0.3
473
Tumor
0.3
567
Tumor
0.3
817
Tumor
0.3
937
Tumor
0.3
665
Tumor
0.3
427
Tumor
0.2
523
Tumor
0.2
341
Tumor
0.2
493
Tumor
0.2
1013
Tumor
0.2
465
Tumor
0.2
285
Tumor
0.2
537
Tumor
0.2
1027
Tumor
0.2
447
Tumor
0.2
375
Tumor
0.2
217
Tumor
0.2
455
Tumor
0.2
671
Tumor
0.2
283
Tumor
0.2
393
Tumor
0.2
231
Tumor
0.2
883
Tumor
0.2
737
Tumor
0.2
383
Tumor
0.2
297
Tumor
0.1
445
Tumor
0.1
867
Tumor
0.1
187
Tumor
0.1
721
Tumor
0.1
343
Tumor
0.1
471
Tumor
0.1
451
Tumor
0.1
923
Tumor
0.1
268
Normal
0.1
391
Tumor
0.1
415
Tumor
0.1
367
Tumor
0.1
963
Tumor
0.1
517
Tumor
0.1
141
Tumor
0.1
823
Tumor
0.1
191
Tumor
0.1
535
Tumor
0.1
917
Tumor
0.1
267
Tumor
0.1
147
Tumor
0.1
785
Tumor
0.1
863
Tumor
0.1
525
Tumor
0.1
697
Tumor
0.0
481
Tumor
0.0
195
Tumor
0.0
635
Tumor
0.0
444
Normal
0.0
741
Tumor
0.0
491
Tumor
0.0
1025
Tumor
0.0
113
Tumor
0.0
395
Tumor
0.0
461
Tumor
0.0
125
Tumor
0.0
536
Normal
0.0
921
Tumor
0.0
553
Tumor
0.0
1045
Tumor
0.0
983
Tumor
0.0
873
Tumor
0.0
755
Tumor
0.0
311
Tumor
0.0
423
Tumor
0.0
135
Tumor
0.0
492
Normal
0.0
911
Tumor
-0.1
861
Tumor
-0.1
955
Tumor
-0.1
366
Normal
-0.1
227
Tumor
-0.1
966
Normal
-0.1
368
Normal
-0.1
713
Tumor
-0.1
515
Tumor
-0.1
365
Tumor
-0.1
478
Normal
-0.1
298
Normal
-0.1
1041
Tumor
-0.1
685
Tumor
-0.1
124
Normal
-0.1
114
Normal
-0.1
188
Normal
-0.1
332
Normal
-0.1
361
Tumor
-0.1
913
Tumor
-0.1
698
Normal
-0.1
563
Tumor
-0.1
488
Normal
-0.1
954
Normal
-0.1
126
Normal
-0.1
958
Normal
-0.1
127
Tumor
-0.1
314
Normal
-0.1
513
Tumor
-0.1
434
Normal
-0.1
448
Normal
-0.1
815
Tumor
-0.1
641
Tumor
-0.1
715
Tumor
-0.1
432
Normal
-0.1
261
Tumor
-0.2
498
Normal
-0.2
363
Tumor
-0.2
968
Normal
-0.2
327
Tumor
-0.2
538
Normal
-0.2
192
Normal
-0.2
344
Normal
-0.2
1043
Tumor
-0.2
162
Normal
-0.2
223
Tumor
-0.2
257
Tumor
-0.2
421
Tumor
-0.2
662
Normal
-0.2
145
Tumor
-0.2
284
Normal
-0.2
376
Normal
-0.2
412
Normal
-0.2
494
Normal
-0.2
615
Tumor
-0.2
964
Normal
-0.2
111
Normal
-0.2
262
Normal
-0.2
978
Normal
-0.2
386
Normal
-0.2
352
Normal
-0.2
353
Tumor
-0.2
384
Normal
-0.2
884
Normal
-0.2
1015
Tumor
-0.2
666
Normal
-0.2
1044
Normal
-0.2
484
Normal
-0.2
148
Normal
-0.2
212
Normal
-0.2
128
Normal
-0.2
146
Normal
-0.2
218
Normal
-0.2
446
Normal
-0.2
878
Normal
-0.2
686
Normal
-0.2
1046
Normal
-0.2
172
Normal
-0.2
976
Normal
-0.2
546
Normal
-0.2
938
Normal
-0.2
636
Normal
-0.2
882
Normal
-0.2
278
Normal
-0.3
137
Tumor
-0.3
944
Normal
-0.3
912
Normal
-0.3
664
Normal
-0.3
224
Normal
-0.3
138
Normal
-0.3
1014
Normal
-0.3
627
Tumor
-0.3
142
Normal
-0.3
617
Tumor
-0.3
746
Normal
-0.3
925
Tumor
-0.3
952
Normal
-0.3
956
Normal
-0.3
286
Normal
-0.3
924
Normal
-0.3
272
Normal
-0.3
528
Normal
-0.3
557
Tumor
-0.3
388
Normal
-0.3
857
Tumor
-0.3
342
Normal
-0.3
222
Normal
-0.3
394
Normal
-0.3
462
Normal
-0.3
672
Normal
-0.3
214
Normal
-0.3
186
Normal
-0.3
981
Tumor
-0.3
1026
Normal
-0.3
228
Normal
-0.3
416
Normal
-0.3
534
Normal
-0.3
786
Normal
-0.3
364
Normal
-0.3
616
Normal
-0.3
232
Normal
-0.3
648
Normal
-0.3
362
Normal
-0.3
618
Normal
-0.3
426
Normal
-0.3
778
Normal
-0.3
554
Normal
-0.3
1032
Normal
-0.3
136
Normal
-0.3
756
Normal
-0.3
1028
Normal
-0.3
436
Normal
-0.3
328
Normal
-0.3
452
Normal
-0.3
396
Normal
-0.3
915
Tumor
-0.3
628
Normal
-0.3
864
Normal
-0.3
196
Normal
-0.3
984
Normal
-0.4
132
Normal
-0.4
464
Normal
-0.4
716
Normal
-0.4
354
Normal
-0.4
926
Normal
-0.4
258
Normal
-0.4
714
Normal
-0.4
312
Normal
-0.4
722
Normal
-0.4
472
Normal
-0.4
358
Normal
-0.4
456
Normal
-0.4
922
Normal
-0.4
356
Normal
-0.4
392
Normal
-0.4
918
Normal
-0.4
424
Normal
-0.4
574
Normal
-0.4
696
Normal
-0.4
466
Normal
-0.4
558
Normal
-0.4
474
Normal
-0.4
916
Normal
-0.4
642
Normal
-0.4
422
Normal
-0.4
728
Normal
-0.4
914
Normal
-0.4
744
Normal
-0.4
414
Normal
-0.4
982
Normal
-0.4
468
Normal
-0.4
1022
Normal
-0.4
866
Normal
-0.4
851
Tumor
-0.4
564
Normal
-0.4
1042
Normal
-0.4
824
Normal
-0.4
874
Normal
-0.5
745
Tumor
-0.5
428
Normal
-0.5
858
Normal
-0.5
868
Normal
-0.5
526
Normal
-0.5
524
Normal
-0.5
516
Normal
-0.5
482
Normal
-0.5
738
Normal
-0.5
1016
Normal
-0.5
568
Normal
-0.5
862
Normal
-0.6
572
Normal
-0.6
514
Normal
-0.6
742
Normal
-0.6
852
Normal
-0.7
518
Normal
-0.7
723
Tumor
-0.7
816
Normal
-0.8
818
Normal
-0.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
