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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
82.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
68.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
60.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
53.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
49.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
48.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
47.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
47.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
45.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
42.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
41.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
40.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
38.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
38.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
34.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
33.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
33.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
30.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
26.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
25.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
24.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
23.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
23.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
22.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
129.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
72.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
64.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
39.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
36.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
35.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
34.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
33.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
31.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
27.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
27.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
25.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
23.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
18.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
15.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
15.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
11.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
10.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
9.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
9.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
8.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
8.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
8.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
8.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
8.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
8.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
8.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
8.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
8.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
7.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
7.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
7.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
7.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
7.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
7.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
6.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
6.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
6.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
6.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
6.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
6.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
6.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
6.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
6.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
6.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
6.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
6.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
6.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
6.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
6.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
6.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
6.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
6.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
6.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
6.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
6.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
6.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
6.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
6.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
6.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
5.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
5.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
5.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
5.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
5.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
5.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
5.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
5.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
5.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
5.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
5.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
5.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
5.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
5.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
5.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
5.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
5.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
5.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
5.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
5.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
5.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
5.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
5.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
5.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
5.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
5.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
5.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
5.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
5.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
5.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
4.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
4.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
4.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
4.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
4.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
4.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
4.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
4.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
4.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
4.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
4.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
3.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
3.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
3.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
3.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
3.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
3.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
3.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
3.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
3.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
3.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
3.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
3.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
3.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
3.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
3.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
2.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
2.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
1.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
1.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
1.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
49.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
26.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
8.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
8.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
8.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
8.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
7.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
7.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
7.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
7.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
7.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
6.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
6.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
6.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
6.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
6.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
6.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
6.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
6.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
5.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
5.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
5.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
4.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
4.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
4.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
4.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
4.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
4.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
4.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
4.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
4.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
3.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
3.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
3.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
3.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
3.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
3.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
3.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
73.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
68.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
56.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
48.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
47.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
45.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
38.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
37.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
37.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
34.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
32.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
32.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
32.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
32.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
29.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
28.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
26.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
26.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
24.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
24.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
23.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
23.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
23.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
22.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
20.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
20.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
18.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
17.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
17.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
16.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
15.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
10.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
9.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
6.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
6.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
6.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
5.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
4.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
4.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
4.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
3.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
3.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
2.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
