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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
243.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
199.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
181.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
143.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
141.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
138.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
112.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
108.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
100.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
84.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
55.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
51.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
46.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
37.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
34.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB3 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
212.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
184.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
154.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
122.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
100.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
89.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
82.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
73.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
73.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
60.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
54.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
51.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
51.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
49.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
46.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
45.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
45.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
41.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
33.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
33.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
31.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
27.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
27.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
26.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
24.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
13.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
12.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
11.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
10.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
8.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
7.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
7.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
6.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
5.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
5.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
5.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
5.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
5.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
5.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
4.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
4.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
4.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
4.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
4.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
4.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
4.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
4.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
4.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
4.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
4.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
4.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
4.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
4.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
4.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
4.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
4.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
4.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
4.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
3.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
3.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
3.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
3.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
3.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
3.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
3.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
3.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
3.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
3.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
3.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
3.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
3.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
3.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
3.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
3.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
3.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
3.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
3.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
3.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
3.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
3.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
3.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
3.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
3.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
3.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
3.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
3.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
3.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
3.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
3.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
3.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
2.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
2.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
2.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
2.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
2.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
2.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
2.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
2.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
2.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
2.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
2.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
2.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
2.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
2.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
2.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
2.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
2.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
2.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
2.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
2.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
2.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
2.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
2.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
2.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
2.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
2.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
2.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
2.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
2.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
1.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
1.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
1.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
1.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
1.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
1.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
1.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
1.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
1.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
1.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
1.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
1.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
1.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
1.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
1.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
1.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
1.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
1.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
1.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
1.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
1.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
1.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
1.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
1.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
1.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
1.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
1.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
1.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
1.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
0.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
0.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
0.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
0.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
0.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
0.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
0.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
0.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
0.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
0.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
0.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
0.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
0.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
0.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
0.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
0.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
0.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
0.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
0.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
0.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
0.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
0.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
0.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
0.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
0.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
0.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
0.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
0.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
0.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
0.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
0.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
0.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
0.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
0.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
0.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
0.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
0.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
0.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
0.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
0.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
0.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
0.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
0.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
0.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
0.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
0.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
0.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
0.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
0.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
0.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
0.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
0.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
0.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
0.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
0.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
0.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
0.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
0.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
0.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
0.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
0.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
0.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
0.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
0.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
0.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
0.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
0.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
0.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
0.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
0.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
0.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
0.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
0.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
0.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
0.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
0.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
0.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
0.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
0.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
0.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
0.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
0.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
0.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
0.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
0.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
0.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
0.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
0.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
0.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
0.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
0.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
0.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
0.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
0.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
0.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
0.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
0.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
0.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
0.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
0.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
0.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
0.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
0.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
0.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
0.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
0.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
0.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
0.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
0.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
0.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
0.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
0.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
0.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
0.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
0.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB3 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
184.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
141.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
70.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
49.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
35.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
8.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
7.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
6.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
6.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
5.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
4.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
4.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
4.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
3.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
3.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
3.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
3.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
2.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
2.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
2.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
2.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
2.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
2.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
1.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
1.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
1.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
1.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
0.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
0.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
0.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
0.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
0.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
0.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
0.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
0.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
0.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
0.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
0.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
0.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
0.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
0.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
0.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
0.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
0.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
0.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
0.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
0.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TUBB3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
249.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
236.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
198.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
197.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
189.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
181.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
178.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
177.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
174.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
164.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
160.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
159.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
156.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
156.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
154.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
150.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
145.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
143.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
142.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
134.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
128.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
126.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
125.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
124.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
123.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
120.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
119.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
117.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
117.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
116.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
115.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
114.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
111.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
110.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
110.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
108.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
106.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
103.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
102.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
100.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
100.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
100.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
99.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
98.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
97.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
97.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
95.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
94.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
94.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
93.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
93.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
92.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
88.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
88.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
87.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
84.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
84.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
82.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
82.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
82.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
81.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
81.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
74.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
74.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
74.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
73.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
72.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
72.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
72.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
72.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
71.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
70.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
70.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
70.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
68.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
68.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
67.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
66.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
66.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
66.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
65.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
65.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
64.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
64.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
63.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
63.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
63.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
62.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
62.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
62.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
61.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
60.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
59.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
59.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
59.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
58.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
58.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
56.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
56.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
56.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
55.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
55.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
55.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
54.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
53.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
53.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
53.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
52.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
52.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
52.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
51.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
51.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
51.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
51.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
50.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
50.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
49.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
49.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
48.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
47.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
46.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
46.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
45.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
45.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
45.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
44.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
44.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
44.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
43.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
42.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
41.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
40.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
40.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
39.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
37.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
37.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
37.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
35.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
34.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
33.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
33.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
32.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
31.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
30.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
30.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
28.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
24.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
19.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
19.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
19.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
17.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
16.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
11.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
6.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
5.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
2.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
0.6
CPT0017850003
Tumor
0.6
CPT0021240003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0076330003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0081880003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0025290003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0077110003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0000870016
Tumor
N/A
CPT0009000003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0088780001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0066430001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0077140001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0078840001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0086370003
Normal
-0.3
CPT0088550004
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0079300001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
