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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12440.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
88167.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
73653.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
62105.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
50980.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
50209.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
49645.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
49555.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
45382.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
43627.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
42983.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
39821.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
39754.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
38138.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
38096.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
38007.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
37647.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
37038.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
36708.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
36119.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
36034.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
35855.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
35402.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
34535.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
34460.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
34129.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
33228.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
33145.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
33112.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
33091.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
32240.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
30848.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
30639.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
29774.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
29644.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
29530.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
29305.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
29225.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
29063.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
28872.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
28615.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
28611.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
27938.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
27758.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
27642.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
27386.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27351.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
27167.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
27083.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
26714.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
26634.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
26113.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
25719.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25468.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
25238.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
24830.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
24584.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24376.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
24107.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
24052.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
23889.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23652.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23270.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
23174.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23059.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22338.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22190.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
22061.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21947.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
21807.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21389.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
21078.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
20865.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
20830.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
20085.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
19752.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
19559.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19329.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19301.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19116.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19058.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18955.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
18899.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18864.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
18829.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18767.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
18682.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
18511.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
18404.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18400.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
18385.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
18223.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18207.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
18146.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
18116.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
18051.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17887.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
17808.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17661.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
17391.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
17383.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
17085.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
17029.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
16891.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16882.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
16833.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16749.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
16357.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
16327.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
16201.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16160.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16079.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16057.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15748.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15679.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
15651.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15555.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15068.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
14998.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14644.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
14430.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14301.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14251.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14104.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
14023.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13924.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13709.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13647.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13646.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13564.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13487.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
13331.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13280.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13278.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13253.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13205.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13136.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
12925.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
12913.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12854.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12698.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12513.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12438.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12291.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11832.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
11796.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11727.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11711.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11697.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11658.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11649.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
11607.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
11510.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11304.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11248.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11222.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11092.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10945.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10935.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10799.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10744.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
10670.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10615.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10504.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10499.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10475.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10444.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10019.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9838.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9812.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9785.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9701.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9626.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9493.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9436.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
9360.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9285.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9217.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9054.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8979.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8931.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8665.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8658.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
8649.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8568.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8551.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8494.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8443.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
8361.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8341.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
8326.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8107.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8063.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8012.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7938.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7918.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7859.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
7837.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7811.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7806.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7756.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7199.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7188.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7048.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6836.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6824.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6544.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6515.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6459.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6289.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6180.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
6053.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6050.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6023.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6013.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5969.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5913.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
5877.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5823.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5798.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5727.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5704.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5526.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5463.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5323.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5288.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5259.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5107.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5064.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4937.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4913.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4897.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4865.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4742.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4730.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4713.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4576.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4562.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4544.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4445.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4407.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4373.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4322.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4245.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4177.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4141.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4132.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3964.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3942.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3934.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3930.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3910.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
3754.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3573.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3501.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
3465.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3417.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3405.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3395.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3331.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3265.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3254.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3240.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3201.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3192.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3164.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3160.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3090.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3078.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3050.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3030.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2965.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2961.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2909.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2854.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2753.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2711.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
2702.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2700.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2574.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2405.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2192.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2179.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2177.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2154.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2144.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2134.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2066.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2059.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
2036.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2032.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2032.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2023.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1999.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1997.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1888.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1845.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1789.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1747.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1714.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1681.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1659.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1604.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1599.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1552.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1538.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1509.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1446.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1388.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1357.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1339.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1299.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1291.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1261.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1246.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1221.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1087.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1058.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1049.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1041.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1032.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1031.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
946.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
840.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
820.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
804.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
788.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
752.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
669.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
662.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
633.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
617.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
597.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
585.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
545.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
500.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
472.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
442.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
439.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
409.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
353.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
314.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
309.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
271.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
223.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
212.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
183.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
173.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
156.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
130.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
81.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
75.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
62.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
57.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
47.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
35.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
31.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
28.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
17.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HP is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7114.2
Number of samples
231
Samples
Sample
Description
TPM
DO23551
0 years, male, NA, stage:3, dead, 150 days
43931.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
42817.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
38774.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
32871.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
31735.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31520.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
30468.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
28673.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
28183.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28005.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
26030.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25431.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
23971.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
23193.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
22466.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
22103.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
21675.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20732.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
20574.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19941.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19185.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
19100.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
18912.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
18210.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
18116.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
17741.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
17510.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
17060.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
16101.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
15868.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15629.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15451.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15310.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15276.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
15196.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
14646.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13149.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
13124.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12791.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12551.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12537.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
12428.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
12262.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
12219.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
11993.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
11966.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
11570.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
11486.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11317.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11131.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10902.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10483.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
10443.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
10313.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9851.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9729.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
9438.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9197.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
9179.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
9155.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9147.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9026.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8952.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
8572.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8495.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8424.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
8255.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
8241.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
8154.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
8099.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7821.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7810.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
7790.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
7699.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
7600.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
7205.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7109.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
7040.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
6758.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
6734.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
6687.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
6645.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
6609.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
6572.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
6553.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
6550.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
6361.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
6338.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6303.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
6130.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6116.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
6062.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
5841.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
5810.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
5768.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
5735.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
5733.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
5699.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5677.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
5635.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
5630.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
5374.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
5194.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
5176.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5094.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
4867.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4815.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
4788.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
4675.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
4652.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
4631.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4562.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
4548.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
4495.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
4473.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
4451.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
4358.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4304.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
4247.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
4214.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4109.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
4077.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
3985.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
3864.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
3833.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
3775.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
3727.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
3678.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
3636.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
3598.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
3568.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
3560.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
3541.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
3394.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3391.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
3306.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3059.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
3050.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
2992.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
2904.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
2828.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
2814.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
2725.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
2691.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2686.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
2637.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
2572.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
2571.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
2558.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2533.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2501.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
2466.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
2290.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
2287.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
2171.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
2167.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
2165.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
2138.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
2090.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2004.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
1987.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1986.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
1923.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
1881.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
1798.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1490.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
1457.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
1453.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1402.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1264.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1245.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
1226.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
1205.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1180.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
1161.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
1142.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
1081.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
1068.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1038.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
1023.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
1021.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
970.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
954.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
953.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
946.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
905.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
880.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
868.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
836.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
698.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
690.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
686.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
606.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
523.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
512.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
495.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
490.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
454.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
418.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
393.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
382.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
327.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
305.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
275.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
263.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
233.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
213.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
193.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
169.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
158.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
103.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
66.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
49.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
45.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
44.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
40.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
37.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
36.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
33.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
21.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
18.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
981
Tumor
1.6
218
Normal
1.2
113
Tumor
1.1
937
Tumor
1.0
327
Tumor
1.0
536
Normal
1.0
636
Normal
0.8
723
Tumor
0.8
1015
Tumor
0.8
518
Normal
0.8
142
Normal
0.8
778
Normal
0.8
368
Normal
0.8
554
Normal
0.8
396
Normal
0.7
526
Normal
0.7
391
Tumor
0.7
217
Tumor
0.7
286
Normal
0.6
686
Normal
0.6
857
Tumor
0.6
728
Normal
0.6
124
Normal
0.6
574
Normal
0.6
635
Tumor
0.6
697
Tumor
0.6
568
Normal
0.6
1026
Normal
0.6
866
Normal
0.6
816
Normal
0.6
952
Normal
0.6
392
Normal
0.6
492
Normal
0.5
525
Tumor
0.5
342
Normal
0.5
353
Tumor
0.5
488
Normal
0.5
1016
Normal
0.4
665
Tumor
0.4
746
Normal
0.4
1044
Normal
0.4
228
Normal
0.4
696
Normal
0.4
785
Tumor
0.4
1022
Normal
0.4
514
Normal
0.4
422
Normal
0.4
1045
Tumor
0.4
557
Tumor
0.4
395
Tumor
0.4
344
Normal
0.4
926
Normal
0.4
487
Tumor
0.3
538
Normal
0.3
573
Tumor
0.3
1028
Normal
0.3
474
Normal
0.3
426
Normal
0.3
452
Normal
0.3
938
Normal
0.3
222
Normal
0.3
145
Tumor
0.3
375
Tumor
0.3
484
Normal
0.3
862
Normal
0.3
745
Tumor
0.3
968
Normal
0.3
448
Normal
0.3
1014
Normal
0.3
111
Normal
0.3
863
Tumor
0.3
982
Normal
0.3
196
Normal
0.3
984
Normal
0.3
861
Tumor
0.2
553
Tumor
0.2
195
Tumor
0.2
648
Normal
0.2
358
Normal
0.2
376
Normal
0.2
138
Normal
0.2
1046
Normal
0.2
436
Normal
0.2
744
Normal
0.2
546
Normal
0.2
918
Normal
0.2
954
Normal
0.2
186
Normal
0.1
756
Normal
0.1
777
Tumor
0.1
232
Normal
0.1
558
Normal
0.1
146
Normal
0.1
755
Tumor
0.1
467
Tumor
0.1
722
Normal
0.1
662
Normal
0.1
352
Normal
0.1
414
Normal
0.1
714
Normal
0.1
481
Tumor
0.1
572
Normal
0.1
914
Normal
0.1
412
Normal
0.1
964
Normal
0.1
642
Normal
0.0
944
Normal
0.0
446
Normal
0.0
482
Normal
0.0
738
Normal
0.0
141
Tumor
0.0
223
Tumor
0.0
394
Normal
0.0
513
Tumor
0.0
534
Normal
0.0
564
Normal
0.0
224
Normal
0.0
314
Normal
0.0
956
Normal
0.0
393
Tumor
0.0
298
Normal
0.0
858
Normal
0.0
432
Normal
0.0
966
Normal
0.0
332
Normal
0.0
976
Normal
0.0
955
Tumor
0.0
284
Normal
0.0
356
Normal
0.0
114
Normal
0.0
354
Normal
0.0
698
Normal
-0.1
261
Tumor
-0.1
472
Normal
-0.1
187
Tumor
-0.1
868
Normal
-0.1
387
Tumor
-0.1
713
Tumor
-0.1
616
Normal
-0.1
618
Normal
-0.1
813
Tumor
-0.1
882
Normal
-0.1
786
Normal
-0.1
664
Normal
-0.1
716
Normal
-0.1
878
Normal
-0.1
922
Normal
-0.1
917
Tumor
-0.1
864
Normal
-0.1
528
Normal
-0.1
491
Tumor
-0.1
666
Normal
-0.1
498
Normal
-0.2
128
Normal
-0.2
464
Normal
-0.2
424
Normal
-0.2
916
Normal
-0.2
262
Normal
-0.2
874
Normal
-0.2
466
Normal
-0.2
257
Tumor
-0.2
384
Normal
-0.2
428
Normal
-0.2
468
Normal
-0.3
516
Normal
-0.3
388
Normal
-0.3
126
Normal
-0.3
628
Normal
-0.3
386
Normal
-0.3
523
Tumor
-0.3
456
Normal
-0.3
445
Tumor
-0.3
515
Tumor
-0.3
272
Normal
-0.3
721
Tumor
-0.3
685
Tumor
-0.3
524
Normal
-0.3
258
Normal
-0.3
742
Normal
-0.3
172
Normal
-0.3
957
Tumor
-0.3
364
Normal
-0.3
814
Normal
-0.3
527
Tumor
-0.3
912
Normal
-0.3
497
Tumor
-0.3
451
Tumor
-0.3
1043
Tumor
-0.3
953
Tumor
-0.3
958
Normal
-0.4
963
Tumor
-0.4
132
Normal
-0.4
148
Normal
-0.4
695
Tumor
-0.4
162
Normal
-0.4
1027
Tumor
-0.4
884
Normal
-0.4
627
Tumor
-0.4
494
Normal
-0.4
423
Tumor
-0.4
978
Normal
-0.4
444
Normal
-0.4
1042
Normal
-0.4
447
Tumor
-0.4
425
Tumor
-0.4
278
Normal
-0.5
715
Tumor
-0.5
1013
Tumor
-0.5
297
Tumor
-0.5
1021
Tumor
-0.5
478
Normal
-0.5
924
Normal
-0.5
672
Normal
-0.5
312
Normal
-0.5
615
Tumor
-0.5
1032
Normal
-0.5
724
Normal
-0.5
125
Tumor
-0.5
852
Normal
-0.5
951
Tumor
-0.5
483
Tumor
-0.5
137
Tumor
-0.5
913
Tumor
-0.6
867
Tumor
-0.6
214
Normal
-0.6
1041
Tumor
-0.6
362
Normal
-0.6
967
Tumor
-0.6
328
Normal
-0.6
1025
Tumor
-0.6
975
Tumor
-0.6
915
Tumor
-0.6
231
Tumor
-0.6
313
Tumor
-0.6
455
Tumor
-0.6
433
Tumor
-0.6
411
Tumor
-0.6
545
Tumor
-0.6
341
Tumor
-0.7
212
Normal
-0.7
191
Tumor
-0.7
366
Normal
-0.7
617
Tumor
-0.7
533
Tumor
-0.7
925
Tumor
-0.7
192
Normal
-0.7
535
Tumor
-0.7
921
Tumor
-0.7
567
Tumor
-0.7
421
Tumor
-0.7
283
Tumor
-0.7
477
Tumor
-0.7
361
Tumor
-0.8
462
Normal
-0.8
136
Normal
-0.8
537
Tumor
-0.8
415
Tumor
-0.8
873
Tumor
-0.8
416
Normal
-0.8
343
Tumor
-0.8
385
Tumor
-0.8
221
Tumor
-0.8
147
Tumor
-0.8
517
Tumor
-0.8
112
Tumor
-0.9
741
Tumor
-0.9
563
Tumor
-0.9
185
Tumor
-0.9
188
Normal
-0.9
647
Tumor
-0.9
285
Tumor
-0.9
881
Tumor
-0.9
943
Tumor
-0.9
737
Tumor
-1.0
471
Tumor
-1.0
727
Tumor
-1.0
413
Tumor
-1.0
571
Tumor
-1.0
865
Tumor
-1.0
268
Normal
-1.0
331
Tumor
-1.1
365
Tumor
-1.1
465
Tumor
-1.1
227
Tumor
-1.1
824
Normal
-1.1
383
Tumor
-1.1
357
Tumor
-1.1
434
Normal
-1.1
123
Tumor
-1.2
443
Tumor
-1.2
431
Tumor
-1.2
127
Tumor
-1.2
883
Tumor
-1.2
427
Tumor
-1.2
851
Tumor
-1.2
641
Tumor
-1.2
473
Tumor
-1.2
277
Tumor
-1.2
663
Tumor
-1.2
965
Tumor
-1.2
911
Tumor
-1.3
463
Tumor
-1.3
671
Tumor
-1.3
367
Tumor
-1.3
131
Tumor
-1.3
818
Normal
-1.4
161
Tumor
-1.4
817
Tumor
-1.4
135
Tumor
-1.4
877
Tumor
-1.4
351
Tumor
-1.5
355
Tumor
-1.5
977
Tumor
-1.5
661
Tumor
-1.5
983
Tumor
-1.5
363
Tumor
-1.5
493
Tumor
-1.6
435
Tumor
-1.6
213
Tumor
-1.6
743
Tumor
-1.6
171
Tumor
-1.6
923
Tumor
-1.7
271
Tumor
-1.7
211
Tumor
-1.8
311
Tumor
-1.8
1031
Tumor
-1.9
461
Tumor
-2.0
815
Tumor
-2.1
267
Tumor
-2.1
823
Tumor
-2.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.