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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
60.2
nTPM
GTEx:
60.2
nTPM
FANTOM5:
132.9
Scaled Tags Per Million
Pig:
34.9
nTPM
Mouse:
159.7
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
60.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 60.2
Samples: 105
Max nTPM: 105.9
Min nTPM: 41.3
Std nTPM: 10.6
Median nTPM:
308_1
70 years, female
105.9
120_1
70 years, female
88.8
6_1
73 years, female
81.4
379_1
60 years, male
80.1
307_1
66 years, female
79.4
42_1
85 years, male
78.2
41_1
94 years, female
77.8
375_1
74 years, female
76.7
35_1
74 years, female
75.6
162_1
79 years, female
75.4
17_1
71 years, male
75.3
119_1
70 years, female
71.8
386_1
76 years, male
71.8
173_1
67 years, male
71.4
142_1
61 years, female
71.2
495_1
57 years, female
71.0
4_1
88 years, female
70.6
89_1
63 years, male
70.2
117_1
61 years, male
69.7
384_1
83 years, male
69.6
99_1
64 years, male
69.4
137_1
83 years, male
69.4
347_1
72 years, male
69.1
153_1
70 years, female
68.8
145_1
84 years, male
68.6
2_1
77 years, female
68.1
491_1
89 years, female
67.5
447_1
81 years, male
66.6
322_1
76 years, male
65.6
139_1
64 years, female
65.5
452_1
88 years, female
65.4
218_1
71 years, female
65.2
18_1
88 years, male
64.4
313_1
79 years, female
64.4
317_1
60 years, male
64.4
126_1
63 years, male
64.3
311_1
78 years, male
63.8
115_1
83 years, male
63.5
81_1
67 years, male
62.9
414_1
84 years, female
62.9
109_1
81 years, female
61.5
315_1
62 years, female
60.9
189_1
76 years, male
60.7
501_1
88 years, male
60.3
324_1
76 years, male
59.9
518_1
75 years, female
59.6
319_1
81 years, male
59.2
246_1
77 years, male
58.8
404_1
82 years, female
58.6
237_1
82 years, male
58.4
243_1
75 years, male
58.1
389_1
86 years, female
57.6
265_1
87 years, male
57.5
377_1
82 years, female
57.5
490_1
67 years, female
57.4
351_1
91 years, male
57.3
506_1
65 years, male
57.1
266_1
85 years, male
56.8
526_1
61 years, male
56.5
415_1
77 years, female
56.4
348_1
84 years, male
56.2
396_1
62 years, male
56.1
177_1
74 years, male
55.7
499_1
55 years, female
55.7
466_1
57 years, female
55.4
316_1
62 years, male
55.3
254_1
77 years, female
55.1
32_1
67 years, male
55.0
9_1
66 years, female
54.8
149_1
88 years, male
54.5
468_1
89 years, male
54.3
394_1
75 years, female
54.0
406_1
79 years, male
54.0
293_1
68 years, female
53.6
43_1
64 years, female
53.5
355_1
70 years, female
53.4
376_1
75 years, female
53.4
314_1
67 years, male
52.8
354_1
81 years, female
52.6
264_1
73 years, female
52.1
503_1
68 years, male
51.8
318_1
68 years, male
51.5
405_1
91 years, male
51.3
288_1
66 years, female
51.0
295_1
61 years, female
50.9
321_1
62 years, female
50.9
350_1
84 years, female
50.6
425_1
59 years, female
50.5
480_1
63 years, male
50.5
349_1
83 years, male
50.4
517_1
88 years, male
50.0
217_1
76 years, male
49.6
291_1
76 years, male
49.4
251_1
78 years, male
49.2
320_1
89 years, female
48.6
335_1
73 years, female
48.4
353_1
82 years, female
47.5
292_1
71 years, male
47.3
413_1
59 years, female
46.7
356_1
87 years, female
46.2
229_1
69 years, female
45.9
172_1
72 years, female
45.1
352_1
62 years, male
44.9
286_1
68 years, female
43.4
163_1
78 years, male
41.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.