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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
150.6
nTPM
HPA Brain:
81.1
nTPM
GTEx:
150.6
nTPM
FANTOM5:
148.6
Scaled Tags Per Million
Pig:
103.4
nTPM
Mouse:
354.1
nTPM
Allen mouse:
15.7
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
81.1
Sample id
Sample description
nTPM
Amygdala nTPM: 81.1
2514
Male, age 75, right hemisphere
89.4
2695
Female, age 67, right hemisphere
86.3
1987
Female, age 91, left hemisphere
82.4
2517
Female, age 94, left hemisphere
75.9
2814
Male, age 76, right hemisphere
71.2
Basal amygdala nTPM: 72.4
2609
Male, age 75, right hemisphere
84.8
2110
Male, age 80, left hemisphere
78.0
2243
Female, age 91, right hemisphere
72.2
1955
Male, age 76, both hemispheres
70.6
2685
Female, age 94, left hemisphere
65.9
2827
Female, age 67, right hemisphere
62.8
Central amygdala nTPM: 76.3
2826
Female, age 94, left hemisphere
92.0
2515
Male, age 75, right hemisphere
86.0
2239
Male, age 80, left hemisphere
70.6
1905
Male, age 76, both hemispheres
68.9
2701
Female, age 91, right hemisphere
64.2
Corticomedial amygdala nTPM: 73.1
2428
Male, age 75, right hemisphere
90.1
2829
Male, age 80, left hemisphere
77.4
2242
Female, age 91, right hemisphere
73.1
2240
Male, age 76, both hemispheres
71.6
2429
Female, age 94, left hemisphere
70.7
2535
Female, age 67, right hemisphere
55.8
Lateral amygdala nTPM: 73.8
2534
Female, age 94, left hemisphere
90.0
2516
Male, age 75, right hemisphere
88.4
1883
Male, age 76, both hemispheres
72.8
2256
Male, age 80, left hemisphere
66.1
2830
Female, age 67, right hemisphere
65.7
2255
Female, age 91, right hemisphere
59.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
150.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 150.6
Samples: 152
Max nTPM: 497.6
Min nTPM: 86.1
Std nTPM: 45.5
Median nTPM: 141.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
497.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
352.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
273.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
266.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
261.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
232.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
230.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
216.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
214.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
207.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
205.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
204.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
201.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
195.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
193.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
188.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
182.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
181.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
181.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
179.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
177.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
177.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
176.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
176.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
174.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
174.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
171.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
169.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
167.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
166.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
165.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
165.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
164.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
163.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
161.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
161.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
160.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
159.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
159.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
159.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
158.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
158.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
158.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
157.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
156.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
156.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
156.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
156.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
155.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
155.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
155.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
155.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
154.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
154.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
153.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
153.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
152.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
151.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
151.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
150.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
150.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
149.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
148.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
148.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
147.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
147.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
146.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
145.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
145.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
144.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
142.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
142.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
142.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
142.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
141.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
141.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
140.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
140.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
140.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
140.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
139.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
139.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
139.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
139.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
138.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
137.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
137.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
136.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
136.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
136.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
136.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
135.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
135.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
134.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
134.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
133.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
133.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
132.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
132.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
132.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
132.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
132.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
131.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
131.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
131.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
130.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
129.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
129.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
129.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
129.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
128.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
128.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
128.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
128.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
127.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
127.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
126.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
125.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
125.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
124.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
124.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
122.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
122.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
121.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
120.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
120.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
120.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
118.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
117.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
117.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
116.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
116.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
116.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
116.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
115.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
114.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
114.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
113.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
113.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
110.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
108.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
108.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
107.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
107.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
107.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
105.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
104.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
102.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
100.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
97.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
97.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
86.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
354.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 354.1
Samples: 4
Max nTPM: 376.3
Min nTPM: 332.4
Sample A
Male
332.4
Sample B
Male
373.7
Sample C
Female
376.3
Sample D
Female
333.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.