We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
127.6
nTPM
HPA Brain:
78.0
nTPM
GTEx:
127.6
nTPM
FANTOM5:
127.3
Scaled Tags Per Million
Pig:
112.8
nTPM
Mouse:
196.1
nTPM
Allen mouse:
5.5
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 67.0
2586
Male, age 75, left hemisphere
86.5
2666
Male, age 74, left hemisphere
76.2
1870
Female, age 42, unknown
73.2
1827
Male, age 72, unknown
68.8
1833
Male, age 53, unknown
64.1
2019
Male, age 18, unknown
62.7
2411
Female, age 72, unknown
61.9
1830
Male, age 51, unknown
61.8
2828
Female, age 72, unknown
60.1
2219
Male, age 76, both hemispheres
55.3
Dorsal raphe nucleus nTPM: 74.2
2298
Female, age 72, unknown
84.7
1828
Male, age 53, unknown
78.5
2047
Male, age 72, unknown
73.1
2750
Male, age 76, both hemispheres
68.4
2016
Female, age 72, unknown
66.1
Inferior colliculus nTPM: 68.8
2097
Female, age 72, unknown
73.8
1848
Female, age 42, unknown
70.9
2849
Male, age 72, unknown
65.6
1890
Male, age 53, unknown
65.0
Median raphe nucleus nTPM: 70.8
2220
Male, age 76, midline
70.8
Periaquaductal grey, anterior nTPM: 78.0
1947
Male, age 18, unknown
82.2
2502
Female, age 75, unknown
78.8
1795
Male, age 51, unknown
73.0
Periaquaductal grey, dorsal nTPM: 66.8
1840
Male, age 53, unknown
76.9
1831
Male, age 72, unknown
65.2
2850
Male, age 76, both hemispheres
64.1
2464
Female, age 72, unknown
60.9
Periaquaductal grey, lateral nTPM: 63.4
2053
Male, age 18, unknown
64.6
2140
Male, age 76, both hemispheres
64.1
2272
Male, age 74, both hemispheres
61.5
Pretectal area nTPM: 72.1
1944
Female, age 72, unknown
82.4
1816
Male, age 51, unknown
80.5
1817
Female, age 42, unknown
80.5
2007
Male, age 72, unknown
77.0
2224
Female, age 72, unknown
73.9
2825
Male, age 18, unknown
72.8
1815
Male, age 53, unknown
71.1
2273
Male, age 74, both hemispheres
67.8
2667
Female, age 75, unknown
67.5
2407
Male, age 75, both hemispheres
63.7
2316
Male, age 76, right hemisphere
56.3
Red nucleus nTPM: 65.6
1821
Female, age 72, unknown
78.3
2584
Male, age 75, left hemisphere
69.9
2725
Female, age 75, unknown
68.2
2588
Male, age 74, left hemisphere
67.6
2785
Male, age 18, unknown
65.8
2227
Male, age 72, unknown
65.4
2503
Female, age 72, unknown
64.9
1865
Male, age 51, unknown
64.2
2769
Male, age 72, unknown
64.0
1954
Female, age 42, unknown
63.7
1904
Male, age 53, unknown
59.6
2823
Male, age 76, right hemisphere
56.0
Substantia nigra nTPM: 76.8
1916
Female, age 42, unknown
89.4
2241
Male, age 72, unknown
85.6
2665
Male, age 74, both hemispheres
81.9
1851
Male, age 51, unknown
81.0
1941
Male, age 53, unknown
79.4
2590
Female, age 75, unknown
72.6
1889
Female, age 72, unknown
71.8
2699
Male, age 18, unknown
69.6
2583
Male, age 75, right hemisphere
68.3
2409
Female, age 72, unknown
68.1
Superior colliculus nTPM: 70.5
2664
Male, age 75, both hemispheres
78.5
2087
Female, age 72, unknown
75.1
2261
Male, age 18, unknown
74.7
2668
Female, age 75, unknown
74.5
2587
Male, age 74, left hemisphere
74.3
1796
Male, age 53, unknown
70.9
1839
Male, age 51, unknown
70.0
1895
Male, age 76, right hemisphere
63.1
1995
Male, age 72, unknown
62.3
1913
Female, age 42, unknown
61.7
Ventral tegmental area nTPM: 73.1
1915
Female, age 42, unknown
80.6
2223
Female, age 72, unknown
76.0
2410
Female, age 72, unknown
75.9
1942
Male, age 51, unknown
72.0
2021
Male, age 53, unknown
68.8
2218
Male, age 76, both hemispheres
64.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
127.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 127.6
Samples: 139
Max nTPM: 235.3
Min nTPM: 79.5
Std nTPM: 22.9
Median nTPM: 125.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
235.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
200.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
198.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
177.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
166.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
164.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
163.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
163.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
162.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
160.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
159.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
159.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
157.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
155.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
155.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
154.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
153.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
151.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
150.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
150.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
149.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
147.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
147.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
147.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
147.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
147.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
147.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
144.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
144.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
143.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
143.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
142.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
142.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
142.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
141.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
141.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
140.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
140.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
137.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
135.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
134.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
134.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
134.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
132.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
132.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
132.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
131.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
131.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
130.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
130.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
129.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
129.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
129.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
129.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
129.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
128.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
128.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
128.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
128.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
128.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
128.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
128.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
127.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
127.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
126.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
126.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
126.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
126.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
125.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
125.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
125.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
125.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
125.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
125.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
124.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
124.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
124.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
123.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
123.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
123.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
123.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
122.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
121.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
121.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
121.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
120.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
120.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
120.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
120.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
119.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
118.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
118.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
118.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
118.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
117.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
116.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
116.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
116.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
116.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
114.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
113.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
112.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
112.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
112.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
112.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
112.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
110.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
109.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
109.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
108.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
108.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
108.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
108.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
106.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
106.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
106.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
106.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
105.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
105.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
104.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
104.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
103.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
103.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
103.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
102.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
102.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
100.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
100.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
99.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
97.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
96.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
95.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
94.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
93.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
91.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
90.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
87.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
86.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
79.5
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
196.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 196.1
Samples: 4
Max nTPM: 203.3
Min nTPM: 188.0
Sample A
Male
203.3
Sample B
Male
188.0
Sample C
Female
191.6
Sample D
Female
201.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.