Brain tissue expression of ZNF260 in medulla oblongata - The Human Protein Atlas

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SUMMARY

TISSUE

BRAIN

SINGLE CELL

SUBCELL

CANCER

BLOOD

CELL LINE

STRUCTURE

INTERACTION

ZNF260

MEDULLA OBLONGATA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

HPA Brain:	11.6	nTPM
FANTOM5:	14.1	Scaled Tags Per Million

Pig:	16.5	nTPM
Allen mouse:	0.5	Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	11.6

Sample id

Sample description

nTPM

Area postrema
nTPM: 11.2

2799	Male, age 61, both hemispheres	12.1
2306	Male, age 80, both hemispheres	11.5
2054	Male, age 76, both hemispheres	10.0

Dorsal medullary reticular nucleus
nTPM: 9.5

2040	Female, age 85, both hemispheres	10.2
2373	Male, age 61, both hemispheres	9.8
2088	Male, age 76, both hemispheres	8.7

Dorsal motor vagal complex
nTPM: 9.5

2185	Male, age 76, both hemispheres	11.2
2797	Male, age 61, both hemispheres	10.6
2813	Female, age 72, unknown	9.9
2000	Male, age 74, unknown	9.5
2807	Female, age 85, both hemispheres	9.3
2643	Male, age 74, both hemispheres	8.8
2133	Female, age 91, both hemispheres	8.3
2844	Male, age 55, unknown	8.1

Gigantocellular reticular nuclei, medullary
nTPM: 10.6

2387	Female, age 91, both hemispheres	11.7
1876	Female, age 85, both hemispheres	11.6
2314	Male, age 61, both hemispheres	11.5
2022	Male, age 76, right hemisphere	9.7
2462	Male, age 74, both hemispheres	9.6
2310	Male, age 80, both hemispheres	9.5

Gigantocellular reticular nuclei, pars
nTPM: 9.0

2084	Female, age 85, both hemispheres	9.2
2330	Male, age 80, both hemispheres	9.0
2336	Male, age 61, both hemispheres	9.0
2706	Male, age 80, both hemispheres	8.9
2168	Male, age 76, both hemispheres	8.8

Inferior olive
nTPM: 10.7

2178	Male, age 61, both hemispheres	11.6
2563	Male, age 74, both hemispheres	10.9
2085	Female, age 85, both hemispheres	10.7
2379	Male, age 80, both hemispheres	10.4
2628	Female, age 91, both hemispheres	9.7

Lateral medullary reticular nucleus
nTPM: 10.6

2305	Male, age 74, both hemispheres	11.2
2804	Female, age 91, both hemispheres	11.1
2374	Male, age 61, both hemispheres	10.9
2190	Female, age 85, both hemispheres	10.5
2044	Male, age 76, both hemispheres	9.9
2852	Male, age 80, both hemispheres	9.8

Medial olivary nucleus
nTPM: 11.6

1962	Male, age 76, both hemispheres	12.0
2138	Female, age 91, both hemispheres	11.9
1943	Male, age 61, both hemispheres	11.6
2851	Male, age 80, both hemispheres	10.8

Medial vestibular nucleus
nTPM: 10.0

2803	Female, age 91, both hemispheres	11.3
2801	Male, age 74, both hemispheres	10.5
2093	Male, age 80, both hemispheres	10.0
2743	Female, age 85, both hemispheres	9.9
2134	Male, age 76, both hemispheres	9.2
2624	Male, age 61, both hemispheres	9.0

Motor hypoglossal nucleus
nTPM: 9.6

2461	Male, age 61, both hemispheres	11.1
2125	Female, age 91, both hemispheres	10.6
2182	Male, age 80, both hemispheres	9.4
2132	Female, age 85, both hemispheres	9.1
2277	Male, age 76, both hemispheres	8.1

Nucleus ambiguus
nTPM: 8.9

2071	Male, age 76, both hemispheres	12.3
2096	Female, age 85, both hemispheres	5.5

Nucleus cuneatus
nTPM: 10.2

2380	Male, age 80, both hemispheres	12.8
2808	Female, age 85, both hemispheres	11.7
2381	Male, age 80, both hemispheres	10.5
2805	Female, age 91, both hemispheres	10.2
2376	Male, age 61, both hemispheres	10.0
2564	Male, age 74, both hemispheres	9.7
2100	Male, age 76, both hemispheres	9.5
2562	Male, age 61, both hemispheres	8.8
2131	Male, age 76, both hemispheres	8.5

Nucleus gracilis
nTPM: 10.5

2382	Male, age 80, both hemispheres	11.4
2627	Male, age 74, both hemispheres	10.4
2299	Female, age 85, both hemispheres	9.7

Nucleus raphe obscurus
nTPM: 11.6

2845	Female, age 85, midline	12.4
2142	Male, age 76, midline	12.0
2800	Male, age 61, midline	10.4

Nucleus raphe pallidus
nTPM: 10.6

2145	Male, age 76, midline	12.0
1924	Male, age 61, midline	10.6
2183	Male, age 80, midline	9.1

Nucleus tractus solitarii
nTPM: 9.8

2144	Female, age 91, right hemisphere	14.9
2191	Female, age 85, both hemispheres	9.0
2656	Male, age 76, both hemispheres	8.2
2307	Male, age 80, both hemispheres	7.1

Parvicellular reticular nuclei
nTPM: 9.5

2095	Male, age 76, both hemispheres	10.4
2119	Male, age 80, both hemispheres	9.8
2558	Male, age 74, both hemispheres	8.4

Parvicellular reticular nuclei, medullary
nTPM: 9.1

2181	Male, age 80, left hemisphere	9.6
2189	Female, age 91, both hemispheres	9.6
2091	Female, age 85, both hemispheres	8.0

Peritrigeminal nucleus
nTPM: 9.7

2136	Male, age 76, both hemispheres	10.3
2179	Male, age 61, both hemispheres	10.1
2067	Female, age 85, both hemispheres	8.7

Prepositus hypoglossal nucleus
nTPM: 10.6

2855	Female, age 85, right hemisphere	12.3
2086	Male, age 80, both hemispheres	8.9

Spinal trigeminal nucleus, caudal
nTPM: 9.8

2312	Male, age 61, both hemispheres	10.7
2390	Female, age 91, both hemispheres	10.0
2447	Male, age 76, both hemispheres	9.8
2642	Male, age 74, both hemispheres	9.3
2308	Male, age 80, both hemispheres	9.1

Spinal trigeminal nucleus, interpolar
nTPM: 9.3

2389	Female, age 91, both hemispheres	10.1
2066	Male, age 76, right hemisphere	9.8
2386	Female, age 85, both hemispheres	9.6
2033	Male, age 80, both hemispheres	9.0
2625	Male, age 61, both hemispheres	8.0

Spinal vestibular nucleus
nTPM: 9.8

2806	Female, age 85, both hemispheres	11.2
2748	Male, age 76, both hemispheres	10.1
2186	Female, age 91, both hemispheres	10.0
2384	Male, age 74, both hemispheres	9.8
2796	Male, age 61, both hemispheres	9.4
2780	Male, age 80, both hemispheres	8.5

Superior vestibular nucleus
nTPM: 10.4

2383	Male, age 74, both hemispheres	11.8
2015	Male, age 80, both hemispheres	10.2
2061	Male, age 76, both hemispheres	9.4

Ventral medullary reticular nucleus
nTPM: 9.6

2372	Male, age 61, both hemispheres	10.9
2060	Male, age 76, both hemispheres	8.3

Ventrolateral medulla, A1-C1 cell groups
nTPM: 10.3

2302	Female, age 91, both hemispheres	10.8
2180	Male, age 61, both hemispheres	10.5
1986	Male, age 76, both hemispheres	10.2
2118	Male, age 80, both hemispheres	10.0
2741	Female, age 85, both hemispheres	10.0

MEDULLA OBLONGATA - FANTOM5 CAGEⁱ

Max subtype Scaled Tags Per Millionⁱ Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.	14.1

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Medulla oblongata
Scaled Tags Per Million: 14.1

FF:10155-103A2	76 years, female	17.8
FF:10174-103C3	60 years, female	16.5
FF:10038-101F2	18-64 years, mixed	8.0

MEDULLA OBLONGATA - Pig RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	16.5

Pig sample

Sample description

nTPM

Medulla oblongata
nTPM: 16.6

Samples: 4

Max nTPM: 18.2
Min nTPM: 15.0

Sample A	Female	18.2
Sample B	Female	16.4
Sample C	Male	15.0
Sample D	Male	16.6

MEDULLA OBLONGATA - Allen Mouse ISHⁱ

Max subtype Expression energyⁱ Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.	0.5

Allen experiment id

Experiment description

Expression energy

Medulla oblongata
Expression energy: 0.5

75080996	Antisense, RP_060412_04_H01, Mouse strain C57BL/6J (56 days, male)	0.6
71280676	Antisense, RP_050818_01_C12, Mouse strain C57BL/6J (56 days, male)	0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

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