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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ADH1C is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
394.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
3859.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2358.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2211.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2031.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1798.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1610.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1588.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1561.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1551.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1528.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1524.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1517.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1503.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1498.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1485.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1482.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1444.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1370.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1350.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1272.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1272.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1242.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1168.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1136.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1132.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1075.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1067.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1052.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1050.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1038.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1031.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1018.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1016.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
985.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
983.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
971.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
971.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
959.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
954.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
950.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
936.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
929.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
919.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
914.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
890.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
885.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
880.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
872.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
865.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
858.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
846.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
843.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
842.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
841.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
839.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
832.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
829.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
827.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
825.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
820.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
813.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
810.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
806.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
805.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
798.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
795.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
791.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
789.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
786.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
777.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
776.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
764.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
759.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
752.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
745.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
730.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
722.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
718.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
708.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
699.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
661.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
659.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
658.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
649.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
648.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
642.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
632.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
625.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
624.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
618.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
618.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
606.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
602.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
599.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
596.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
595.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
594.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
593.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
591.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
590.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
580.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
576.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
575.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
571.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
567.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
556.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
550.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
541.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
536.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
521.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
515.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
500.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
494.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
478.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
470.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
463.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
460.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
459.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
459.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
458.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
456.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
453.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
451.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
443.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
441.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
438.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
434.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
434.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
428.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
413.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
409.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
408.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
407.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
406.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
405.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
404.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
403.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
398.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
397.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
396.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
388.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
370.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
364.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
363.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
362.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
360.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
360.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
359.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
356.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
350.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
346.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
345.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
328.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
327.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
315.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
309.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
300.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
297.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
293.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
292.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
278.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
272.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
269.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
263.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
260.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
258.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
250.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
250.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
249.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
247.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
246.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
245.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
238.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
233.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
231.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
231.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
231.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
231.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
227.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
218.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
218.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
217.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
202.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
201.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
198.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
197.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
196.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
194.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
190.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
188.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
184.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
183.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
181.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
181.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
180.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
177.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
175.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
170.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
169.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
167.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
165.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
165.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
163.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
162.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
160.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
156.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
155.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
154.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
152.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
152.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
152.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
152.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
150.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
148.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
147.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
146.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
139.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
136.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
136.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
135.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
131.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
129.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
126.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
123.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
113.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
113.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
112.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
111.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
111.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
106.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
104.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
103.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
92.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
92.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
91.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
90.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
89.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
83.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
82.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
78.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
78.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
77.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
76.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
71.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
69.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
68.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
67.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
67.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
65.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
64.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
61.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
61.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
58.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
57.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
56.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
56.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
54.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
52.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
51.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
51.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
50.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
50.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
50.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
45.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
44.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
44.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
40.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
34.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
33.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
32.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
31.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
30.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
29.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
28.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
28.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
27.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
25.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
25.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
24.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
24.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
23.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
22.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
20.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
20.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
18.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
16.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
15.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
14.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
13.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
13.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
10.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
9.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
4.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
4.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
2.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
2.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ADH1C is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
450.9
Number of samples
231
Samples
Sample
Description
TPM
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2408.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
2382.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
2311.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1861.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
1739.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
1650.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1455.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
1436.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
1427.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
1377.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
1341.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
1317.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1307.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
1256.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
1254.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
1242.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
1215.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1176.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
1172.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
1157.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1153.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
1150.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1132.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
1113.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1104.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1087.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
1082.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1075.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
1050.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1039.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
1026.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1025.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1011.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
996.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
965.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
963.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
959.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
946.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
933.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
916.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
885.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
854.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
849.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
841.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
830.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
807.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
805.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
797.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
793.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
791.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
787.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
777.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
742.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
735.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
728.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
726.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
721.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
717.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
703.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
703.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
692.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
685.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
672.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
668.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
665.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
633.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
619.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
604.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
587.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
585.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
580.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
553.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
549.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
541.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
524.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
524.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
520.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
518.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
518.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
515.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
514.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
504.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
501.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
494.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
489.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
479.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
476.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
475.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
469.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
463.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
461.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
458.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
451.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
449.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
440.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
436.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
428.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
427.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
424.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
416.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
408.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
405.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
403.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
390.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
376.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
375.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
361.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
359.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
342.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
334.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
326.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
324.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
309.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
308.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
307.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
296.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
296.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
282.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
282.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
277.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
277.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
277.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
276.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
269.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
268.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
265.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
261.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
258.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
258.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
254.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
250.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
250.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
248.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
233.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
218.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
217.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
216.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
210.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
187.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
173.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
168.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
160.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
159.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
157.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
154.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
152.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
148.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
142.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
141.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
136.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
133.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
129.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
127.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
124.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
123.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
121.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
109.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
109.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
106.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
106.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
104.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
103.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
89.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
78.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
78.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
76.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
75.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
68.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
68.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
66.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
63.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
61.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
60.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
53.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
53.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
52.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
46.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
42.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
35.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
34.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
33.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
32.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
32.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
32.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
26.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
26.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
25.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
25.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
24.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
23.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
21.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
18.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
9.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
4.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
1.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
1.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
1.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
1.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
1.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
1.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
342
Normal
1.3
298
Normal
1.1
746
Normal
1.1
744
Normal
1.1
128
Normal
1.1
222
Normal
1.1
196
Normal
1.0
742
Normal
1.0
698
Normal
1.0
436
Normal
0.9
1026
Normal
0.9
546
Normal
0.9
878
Normal
0.9
376
Normal
0.9
482
Normal
0.9
723
Tumor
0.9
862
Normal
0.8
966
Normal
0.8
938
Normal
0.8
618
Normal
0.8
738
Normal
0.8
186
Normal
0.8
358
Normal
0.8
882
Normal
0.8
162
Normal
0.8
132
Normal
0.8
422
Normal
0.7
568
Normal
0.7
484
Normal
0.7
864
Normal
0.7
1022
Normal
0.7
452
Normal
0.7
824
Normal
0.7
111
Normal
0.7
858
Normal
0.7
426
Normal
0.7
366
Normal
0.7
456
Normal
0.7
816
Normal
0.7
332
Normal
0.7
114
Normal
0.7
394
Normal
0.7
952
Normal
0.7
448
Normal
0.7
1016
Normal
0.6
314
Normal
0.6
388
Normal
0.6
982
Normal
0.6
662
Normal
0.6
664
Normal
0.6
976
Normal
0.6
464
Normal
0.6
414
Normal
0.6
488
Normal
0.6
148
Normal
0.6
955
Tumor
0.6
666
Normal
0.6
228
Normal
0.6
412
Normal
0.6
472
Normal
0.6
396
Normal
0.6
432
Normal
0.6
278
Normal
0.6
616
Normal
0.6
258
Normal
0.6
648
Normal
0.5
424
Normal
0.5
818
Normal
0.5
428
Normal
0.5
564
Normal
0.5
446
Normal
0.5
172
Normal
0.5
714
Normal
0.5
146
Normal
0.5
356
Normal
0.5
534
Normal
0.5
696
Normal
0.5
866
Normal
0.5
964
Normal
0.5
214
Normal
0.5
636
Normal
0.5
232
Normal
0.5
716
Normal
0.5
874
Normal
0.5
756
Normal
0.5
518
Normal
0.5
572
Normal
0.5
286
Normal
0.5
354
Normal
0.5
466
Normal
0.5
462
Normal
0.5
956
Normal
0.5
1044
Normal
0.5
914
Normal
0.5
272
Normal
0.5
944
Normal
0.4
1046
Normal
0.4
922
Normal
0.4
138
Normal
0.4
124
Normal
0.4
1032
Normal
0.4
468
Normal
0.4
554
Normal
0.4
386
Normal
0.4
722
Normal
0.4
574
Normal
0.4
642
Normal
0.4
142
Normal
0.4
474
Normal
0.4
218
Normal
0.4
628
Normal
0.4
918
Normal
0.4
352
Normal
0.4
136
Normal
0.4
926
Normal
0.4
728
Normal
0.3
786
Normal
0.3
778
Normal
0.3
1014
Normal
0.3
686
Normal
0.3
924
Normal
0.3
262
Normal
0.3
416
Normal
0.3
392
Normal
0.3
494
Normal
0.2
212
Normal
0.2
364
Normal
0.2
741
Tumor
0.2
1028
Normal
0.2
312
Normal
0.2
558
Normal
0.2
912
Normal
0.2
362
Normal
0.2
968
Normal
0.2
344
Normal
0.2
368
Normal
0.1
954
Normal
0.1
1042
Normal
0.1
852
Normal
0.1
538
Normal
0.1
514
Normal
0.1
516
Normal
0.1
434
Normal
0.1
868
Normal
0.1
328
Normal
0.1
981
Tumor
0.1
126
Normal
0.1
384
Normal
0.1
884
Normal
0.1
526
Normal
0.1
958
Normal
0.1
978
Normal
0.1
528
Normal
0.0
284
Normal
0.0
915
Tumor
0.0
353
Tumor
0.0
672
Normal
0.0
481
Tumor
0.0
984
Normal
-0.1
492
Normal
-0.1
867
Tumor
-0.1
188
Normal
-0.1
478
Normal
-0.1
268
Normal
-0.1
916
Normal
-0.2
224
Normal
-0.2
261
Tumor
-0.3
192
Normal
-0.3
498
Normal
-0.3
911
Tumor
-0.4
1027
Tumor
-0.4
451
Tumor
-0.4
487
Tumor
-0.4
1041
Tumor
-0.4
444
Normal
-0.4
524
Normal
-0.4
217
Tumor
-0.4
393
Tumor
-0.4
415
Tumor
-0.5
141
Tumor
-0.5
431
Tumor
-0.5
617
Tumor
-0.5
755
Tumor
-0.6
861
Tumor
-0.6
721
Tumor
-0.6
857
Tumor
-0.6
423
Tumor
-0.6
823
Tumor
-0.6
161
Tumor
-0.7
137
Tumor
-0.7
536
Normal
-0.7
715
Tumor
-0.7
327
Tumor
-0.8
341
Tumor
-0.8
113
Tumor
-0.8
145
Tumor
-0.8
435
Tumor
-0.9
1043
Tumor
-0.9
461
Tumor
-0.9
447
Tumor
-1.0
647
Tumor
-1.0
913
Tumor
-1.0
615
Tumor
-1.0
195
Tumor
-1.0
112
Tumor
-1.0
563
Tumor
-1.1
863
Tumor
-1.1
185
Tumor
-1.1
433
Tumor
-1.1
865
Tumor
-1.1
187
Tumor
-1.2
171
Tumor
-1.2
1025
Tumor
-1.2
421
Tumor
-1.2
873
Tumor
-1.2
465
Tumor
-1.2
1015
Tumor
-1.2
881
Tumor
-1.2
663
Tumor
-1.2
814
Normal
-1.2
917
Tumor
-1.3
963
Tumor
-1.3
191
Tumor
-1.3
267
Tumor
-1.3
515
Tumor
-1.3
491
Tumor
-1.3
943
Tumor
-1.3
685
Tumor
-1.3
445
Tumor
-1.3
477
Tumor
-1.4
473
Tumor
-1.4
361
Tumor
-1.4
785
Tumor
-1.4
883
Tumor
-1.4
223
Tumor
-1.4
221
Tumor
-1.5
123
Tumor
-1.5
271
Tumor
-1.5
365
Tumor
-1.5
1045
Tumor
-1.5
297
Tumor
-1.5
553
Tumor
-1.5
975
Tumor
-1.6
713
Tumor
-1.6
977
Tumor
-1.6
383
Tumor
-1.6
127
Tumor
-1.6
395
Tumor
-1.6
467
Tumor
-1.7
665
Tumor
-1.7
483
Tumor
-1.7
557
Tumor
-1.7
953
Tumor
-1.7
363
Tumor
-1.7
695
Tumor
-1.7
851
Tumor
-1.7
147
Tumor
-1.7
627
Tumor
-1.7
425
Tumor
-1.7
471
Tumor
-1.7
525
Tumor
-1.8
463
Tumor
-1.8
745
Tumor
-1.8
813
Tumor
-1.8
357
Tumor
-1.8
727
Tumor
-1.8
513
Tumor
-1.8
877
Tumor
-1.8
777
Tumor
-1.8
213
Tumor
-1.8
131
Tumor
-1.8
311
Tumor
-1.8
427
Tumor
-1.8
227
Tumor
-1.9
355
Tumor
-1.9
493
Tumor
-1.9
231
Tumor
-1.9
567
Tumor
-1.9
1021
Tumor
-1.9
1031
Tumor
-1.9
391
Tumor
-2.0
517
Tumor
-2.0
921
Tumor
-2.0
573
Tumor
-2.0
277
Tumor
-2.0
527
Tumor
-2.0
937
Tumor
-2.0
257
Tumor
-2.0
343
Tumor
-2.0
443
Tumor
-2.1
737
Tumor
-2.1
125
Tumor
-2.1
413
Tumor
-2.1
497
Tumor
-2.1
545
Tumor
-2.1
455
Tumor
-2.2
375
Tumor
-2.2
571
Tumor
-2.2
815
Tumor
-2.2
135
Tumor
-2.2
1013
Tumor
-2.2
697
Tumor
-2.2
387
Tumor
-2.2
925
Tumor
-2.2
331
Tumor
-2.3
724
Normal
-2.3
983
Tumor
-2.3
967
Tumor
-2.3
285
Tumor
-2.3
533
Tumor
-2.4
351
Tumor
-2.4
641
Tumor
-2.4
385
Tumor
-2.4
635
Tumor
-2.4
965
Tumor
-2.4
313
Tumor
-2.4
411
Tumor
-2.4
817
Tumor
-2.4
923
Tumor
-2.5
523
Tumor
-2.5
671
Tumor
-2.5
537
Tumor
-2.5
743
Tumor
-2.6
367
Tumor
-2.6
211
Tumor
-2.6
951
Tumor
-2.6
957
Tumor
-2.6
283
Tumor
-2.7
661
Tumor
-2.8
535
Tumor
-3.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.