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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
N4BP2L2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
32.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
30.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
25.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
25.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
24.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
23.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
22.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
22.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
21.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
21.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
20.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
20.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
18.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
17.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
17.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
17.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
17.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
17.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
16.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
16.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
16.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
16.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
16.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
15.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
15.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
15.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
15.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
15.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
15.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
15.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
15.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
15.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
13.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
13.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
12.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
12.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
12.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
10.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
10.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
9.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
9.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
8.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
8.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
5.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
N4BP2L2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.4
Number of samples
231
Samples
Sample
Description
TPM
DO50845
0 years, male, NA, stage:3, alive, 210 days
74.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
70.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
67.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
55.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
44.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
40.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
39.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
38.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
37.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
37.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
36.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
34.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
33.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
32.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
31.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
31.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
31.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
31.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
31.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
30.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
30.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
29.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
29.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
28.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
27.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
27.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
27.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
27.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
27.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
27.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
26.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
26.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
26.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
26.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
26.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
26.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
25.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
25.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
25.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
24.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
24.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
23.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
23.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
23.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
23.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
23.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
23.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
23.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
22.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
22.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
22.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
22.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
22.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
22.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
22.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
22.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
22.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
21.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
21.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
21.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
21.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
21.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
21.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
21.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
21.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
21.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
20.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
20.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
20.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
20.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
20.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
19.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
19.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
19.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
19.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
18.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
18.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
18.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
18.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
18.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
17.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
17.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
16.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
16.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
16.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
16.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
16.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
15.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
14.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
14.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
14.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
12.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
12.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
11.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
11.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
11.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
11.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
10.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
10.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.4
131
Tumor
1.3
435
Tumor
1.1
147
Tumor
1.1
554
Normal
1.0
665
Tumor
1.0
443
Tumor
1.0
663
Tumor
1.0
444
Normal
1.0
446
Normal
1.0
211
Tumor
0.9
666
Normal
0.9
218
Normal
0.9
433
Tumor
0.9
884
Normal
0.9
171
Tumor
0.9
661
Tumor
0.9
162
Normal
0.9
648
Normal
0.9
297
Tumor
0.9
741
Tumor
0.8
277
Tumor
0.8
434
Normal
0.8
217
Tumor
0.8
172
Normal
0.8
393
Tumor
0.8
278
Normal
0.8
314
Normal
0.8
221
Tumor
0.8
313
Tumor
0.8
391
Tumor
0.8
312
Normal
0.8
671
Tumor
0.8
981
Tumor
0.8
257
Tumor
0.8
222
Normal
0.8
425
Tumor
0.8
664
Normal
0.7
332
Normal
0.7
386
Normal
0.7
145
Tumor
0.7
977
Tumor
0.7
568
Normal
0.7
431
Tumor
0.7
572
Normal
0.7
432
Normal
0.7
467
Tumor
0.7
161
Tumor
0.7
662
Normal
0.7
396
Normal
0.7
187
Tumor
0.7
912
Normal
0.7
436
Normal
0.7
445
Tumor
0.7
188
Normal
0.7
213
Tumor
0.7
727
Tumor
0.7
271
Tumor
0.7
195
Tumor
0.7
344
Normal
0.7
558
Normal
0.7
916
Normal
0.7
755
Tumor
0.7
136
Normal
0.7
878
Normal
0.7
672
Normal
0.6
883
Tumor
0.6
573
Tumor
0.6
571
Tumor
0.6
298
Normal
0.6
186
Normal
0.6
113
Tumor
0.6
132
Normal
0.6
1013
Tumor
0.6
125
Tumor
0.6
564
Normal
0.6
911
Tumor
0.6
148
Normal
0.6
331
Tumor
0.6
392
Normal
0.6
388
Normal
0.6
447
Tumor
0.6
557
Tumor
0.6
387
Tumor
0.6
394
Normal
0.6
185
Tumor
0.6
464
Normal
0.6
524
Normal
0.5
1014
Normal
0.5
867
Tumor
0.5
463
Tumor
0.5
231
Tumor
0.5
534
Normal
0.5
647
Tumor
0.5
915
Tumor
0.5
196
Normal
0.5
452
Normal
0.5
415
Tumor
0.5
963
Tumor
0.5
395
Tumor
0.5
138
Normal
0.5
957
Tumor
0.5
567
Tumor
0.5
191
Tumor
0.5
214
Normal
0.5
232
Normal
0.5
482
Normal
0.5
918
Normal
0.5
411
Tumor
0.5
146
Normal
0.5
135
Tumor
0.5
713
Tumor
0.5
456
Normal
0.5
818
Normal
0.5
553
Tumor
0.5
451
Tumor
0.5
975
Tumor
0.4
1022
Normal
0.4
951
Tumor
0.4
1028
Normal
0.4
268
Normal
0.4
563
Tumor
0.4
786
Normal
0.4
192
Normal
0.4
1031
Tumor
0.4
686
Normal
0.4
465
Tumor
0.4
965
Tumor
0.4
813
Tumor
0.4
141
Tumor
0.4
881
Tumor
0.4
353
Tumor
0.4
311
Tumor
0.4
466
Normal
0.4
481
Tumor
0.4
926
Normal
0.4
1032
Normal
0.4
516
Normal
0.4
538
Normal
0.4
352
Normal
0.4
778
Normal
0.4
142
Normal
0.4
412
Normal
0.4
858
Normal
0.4
468
Normal
0.4
923
Tumor
0.4
984
Normal
0.3
921
Tumor
0.3
815
Tumor
0.3
357
Tumor
0.3
385
Tumor
0.3
262
Normal
0.3
137
Tumor
0.3
882
Normal
0.3
258
Normal
0.3
416
Normal
0.3
212
Normal
0.3
922
Normal
0.3
914
Normal
0.3
852
Normal
0.3
536
Normal
0.3
817
Tumor
0.3
966
Normal
0.3
814
Normal
0.3
958
Normal
0.3
721
Tumor
0.3
956
Normal
0.3
964
Normal
0.3
976
Normal
0.3
123
Tumor
0.3
478
Normal
0.3
455
Tumor
0.3
574
Normal
0.3
342
Normal
0.3
714
Normal
0.3
857
Tumor
0.3
261
Tumor
0.3
954
Normal
0.3
363
Tumor
0.3
517
Tumor
0.3
272
Normal
0.2
746
Normal
0.2
546
Normal
0.2
685
Tumor
0.2
924
Normal
0.2
356
Normal
0.2
1042
Normal
0.2
851
Tumor
0.2
477
Tumor
0.2
364
Normal
0.2
526
Normal
0.2
355
Tumor
0.2
864
Normal
0.2
777
Tumor
0.2
877
Tumor
0.2
925
Tumor
0.2
491
Tumor
0.2
1025
Tumor
0.2
715
Tumor
0.2
785
Tumor
0.2
955
Tumor
0.2
414
Normal
0.2
944
Normal
0.2
368
Normal
0.2
124
Normal
0.2
127
Tumor
0.2
1041
Tumor
0.2
723
Tumor
0.2
514
Normal
0.2
913
Tumor
0.2
716
Normal
0.2
497
Tumor
0.2
494
Normal
0.2
978
Normal
0.2
376
Normal
0.2
917
Tumor
0.2
362
Normal
0.2
824
Normal
0.2
474
Normal
0.1
343
Tumor
0.1
968
Normal
0.1
533
Tumor
0.1
384
Normal
0.1
1046
Normal
0.1
1026
Normal
0.1
874
Normal
0.1
953
Tumor
0.1
744
Normal
0.1
756
Normal
0.1
483
Tumor
0.1
742
Normal
0.1
473
Tumor
0.1
695
Tumor
0.1
1015
Tumor
0.1
525
Tumor
0.1
636
Normal
0.1
421
Tumor
0.1
224
Normal
0.1
354
Normal
0.1
492
Normal
0.1
518
Normal
0.1
484
Normal
0.1
1043
Tumor
0.1
696
Normal
0.1
1021
Tumor
0.1
358
Normal
0.1
983
Tumor
0.1
328
Normal
0.1
341
Tumor
0.1
967
Tumor
0.1
616
Normal
0.1
112
Tumor
0.1
628
Normal
0.1
488
Normal
0.1
227
Tumor
0.1
938
Normal
0.0
823
Tumor
0.0
111
Normal
0.0
1027
Tumor
0.0
114
Normal
0.0
472
Normal
0.0
865
Tumor
0.0
863
Tumor
0.0
513
Tumor
0.0
952
Normal
0.0
284
Normal
0.0
493
Tumor
0.0
126
Normal
0.0
868
Normal
0.0
982
Normal
0.0
487
Tumor
0.0
498
Normal
0.0
327
Tumor
0.0
1044
Normal
0.0
873
Tumor
0.0
267
Tumor
0.0
698
Normal
0.0
866
Normal
0.0
471
Tumor
0.0
423
Tumor
0.0
462
Normal
0.0
128
Normal
0.0
642
Normal
0.0
448
Normal
-0.1
738
Normal
-0.1
545
Tumor
-0.1
426
Normal
-0.1
1045
Tumor
-0.1
724
Normal
-0.1
413
Tumor
-0.1
515
Tumor
-0.1
422
Normal
-0.1
361
Tumor
-0.1
285
Tumor
-0.1
424
Normal
-0.1
816
Normal
-0.1
366
Normal
-0.1
228
Normal
-0.1
641
Tumor
-0.1
1016
Normal
-0.1
722
Normal
-0.1
861
Tumor
-0.1
527
Tumor
-0.2
943
Tumor
-0.2
461
Tumor
-0.2
365
Tumor
-0.2
937
Tumor
-0.2
862
Normal
-0.2
523
Tumor
-0.2
528
Normal
-0.2
286
Normal
-0.2
535
Tumor
-0.2
728
Normal
-0.3
428
Normal
-0.3
383
Tumor
-0.3
697
Tumor
-0.3
627
Tumor
-0.3
635
Tumor
-0.3
351
Tumor
-0.3
618
Normal
-0.3
283
Tumor
-0.4
375
Tumor
-0.4
737
Tumor
-0.5
427
Tumor
-0.5
367
Tumor
-0.6
537
Tumor
-0.6
745
Tumor
-0.6
615
Tumor
-0.7
223
Tumor
-0.7
617
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
