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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
546.5
nTPM
FANTOM5:
250.2
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
546.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 247.8
2090
Male, age 80, both hemispheres
303.4
2188
Female, age 91, both hemispheres
258.1
2301
Female, age 85, both hemispheres
250.1
1984
Male, age 76, both hemispheres
179.7
Dorsal cochlear nucleus nTPM: 284.4
2378
Male, age 80, both hemispheres
418.5
2802
Male, age 74, right hemisphere
291.5
2370
Male, age 61, both hemispheres
271.9
2058
Male, age 76, both hemispheres
241.1
2187
Female, age 91, both hemispheres
198.9
Dorsal tegmental nucleus nTPM: 307.6
2326
Male, age 74, both hemispheres
575.3
2358
Male, age 61, both hemispheres
234.6
1936
Male, age 76, left hemisphere
224.9
2083
Male, age 80, both hemispheres
195.6
Dorsolateral tegmental area nTPM: 195.4
2751
Female, age 85, both hemispheres
326.6
2360
Male, age 74, both hemispheres
223.2
2654
Male, age 80, both hemispheres
182.3
2337
Male, age 61, both hemispheres
147.7
2141
Male, age 76, both hemispheres
97.0
Kolliker-Fuse nucleus nTPM: 161.7
2315
Male, age 76, right hemisphere
247.4
2163
Male, age 80, both hemispheres
150.9
2793
Female, age 91, left hemisphere
86.9
Lateral lemniscal nuclei nTPM: 136.3
2453
Male, age 74, right hemisphere
177.5
2746
Female, age 85, left hemisphere
141.6
2169
Male, age 76, both hemispheres
138.7
2036
Male, age 80, both hemispheres
122.3
2320
Female, age 91, left hemisphere
101.2
Lateral parabrachial nucleus nTPM: 212.9
2792
Male, age 76, both hemispheres
354.4
2013
Male, age 80, both hemispheres
200.6
2139
Female, age 85, right hemisphere
194.1
2790
Male, age 61, both hemispheres
102.5
Lateral vestibular nucleus nTPM: 183.2
2184
Male, age 76, both hemispheres
183.8
2311
Male, age 80, both hemispheres
182.7
Locus coeruleus nTPM: 186.6
2720
Male, age 74, both hemispheres
422.5
2317
Female, age 72, unknown
224.4
2788
Male, age 74, unknown
205.5
2014
Male, age 55, unknown
192.0
2162
Male, age 80, both hemispheres
110.3
1980
Male, age 76, both hemispheres
89.1
2123
Female, age 91, both hemispheres
62.5
Medial parabrachial nucleus nTPM: 185.8
2463
Female, age 85, right hemisphere
287.4
2786
Male, age 76, both hemispheres
236.7
2170
Female, age 91, both hemispheres
174.5
2854
Male, age 80, both hemispheres
156.8
2156
Male, age 61, both hemispheres
73.5
Medial periolivary nuclei nTPM: 181.5
2458
Female, age 91, both hemispheres
349.9
2063
Male, age 76, both hemispheres
166.2
2791
Male, age 74, right hemisphere
160.0
2081
Male, age 80, both hemispheres
142.4
2171
Female, age 85, both hemispheres
89.2
Motor facial nucleus nTPM: 225.3
2795
Female, age 91, both hemispheres
355.6
2697
Female, age 85, both hemispheres
254.1
2126
Male, age 61, both hemispheres
227.3
2327
Male, age 80, both hemispheres
189.7
2062
Male, age 76, both hemispheres
180.2
2365
Male, age 74, right hemisphere
144.7
Motor trigeminal nucleus nTPM: 191.6
2321
Female, age 91, both hemispheres
239.6
2309
Male, age 76, both hemispheres
231.7
2560
Male, age 74, both hemispheres
207.1
2079
Male, age 80, both hemispheres
154.1
2335
Male, age 61, both hemispheres
125.7
Nuclei of the trapezoid body nTPM: 139.0
1983
Male, age 76, both hemispheres
206.1
2166
Male, age 80, both hemispheres
196.1
2368
Female, age 91, both hemispheres
145.1
2159
Male, age 61, both hemispheres
81.8
2735
Female, age 85, both hemispheres
65.9
Nucleus raphe magnus nTPM: 191.0
2459
Female, age 91, both hemispheres
449.2
2328
Male, age 80, both hemispheres
220.6
2160
Male, age 61, both hemispheres
153.2
2455
Male, age 74, both hemispheres
134.3
2051
Male, age 76, both hemispheres
96.0
2172
Female, age 85, both hemispheres
92.7
Paramedian reticular nucleus nTPM: 278.0
2050
Female, age 85, both hemispheres
550.3
2052
Male, age 76, both hemispheres
203.3
2057
Male, age 80, both hemispheres
179.9
2313
Male, age 61, both hemispheres
178.4
Pedunculopontine tegmental nucleus nTPM: 172.6
2334
Male, age 80, both hemispheres
271.5
2338
Male, age 61, both hemispheres
125.7
1921
Female, age 85, both hemispheres
120.8
Pontine nuclei nTPM: 155.7
2319
Female, age 91, both hemispheres
206.9
1863
Male, age 55, unknown
177.7
2454
Male, age 74, left hemisphere
173.1
1968
Male, age 76, left hemisphere
169.7
2109
Female, age 72, unknown
168.5
2115
Male, age 80, left hemisphere
124.1
2727
Male, age 61, right hemisphere
116.7
2787
Female, age 85, both hemispheres
108.9
Pontine raphe nucleus nTPM: 219.3
2122
Female, age 85, midline
261.1
2853
Male, age 76, midline
177.6
Posteroventral cochlear nucleus nTPM: 281.6
2752
Female, age 85, both hemispheres
561.3
2135
Female, age 91, both hemispheres
246.6
2341
Male, age 80, both hemispheres
237.9
2371
Male, age 61, both hemispheres
201.9
2070
Male, age 76, both hemispheres
160.2
Principal sensory trigeminal nucleus nTPM: 129.9
2324
Male, age 76, both hemispheres
207.2
2158
Male, age 61, both hemispheres
114.3
2008
Male, age 80, left hemisphere
103.3
2367
Female, age 91, left hemisphere
94.8
Reticular pontine nucleus, caudal nTPM: 248.7
2559
Male, age 74, both hemispheres
355.3
2457
Female, age 91, both hemispheres
320.3
2092
Male, age 76, both hemispheres
216.7
2332
Male, age 80, right hemisphere
102.4
Reticular pontine nucleus, oral nTPM: 205.3
2012
Female, age 85, both hemispheres
272.1
2366
Female, age 91, both hemispheres
267.0
2167
Male, age 76, both hemispheres
170.5
2361
Male, age 74, both hemispheres
160.5
1939
Male, age 80, both hemispheres
156.4
Reticulotegmental nucleus nTPM: 231.1
2452
Male, age 74, both hemispheres
362.3
2325
Male, age 76, both hemispheres
224.4
2333
Male, age 80, both hemispheres
170.3
2322
Female, age 91, both hemispheres
167.3
Spinal trigeminal nucleus, oral nTPM: 546.5
1978
Male, age 76, both hemispheres
1102.4
2164
Male, age 80, both hemispheres
292.5
2737
Female, age 85, both hemispheres
244.5
Subcoeruleus area nTPM: 246.0
2451
Male, age 74, both hemispheres
366.0
2369
Female, age 85, left hemisphere
320.8
2089
Male, age 76, left hemisphere
243.5
1958
Male, age 80, both hemispheres
179.0
2323
Female, age 91, left hemisphere
120.5
Superior olive nTPM: 216.1
2020
Male, age 76, both hemispheres
344.9
2329
Male, age 80, right hemisphere
268.2
2364
Male, age 74, right hemisphere
219.4
2561
Female, age 91, both hemispheres
163.9
1875
Female, age 85, both hemispheres
84.0
Ventral periolivary nuclei nTPM: 191.2
2794
Female, age 91, left hemisphere
326.0
2023
Male, age 76, both hemispheres
236.4
2165
Male, age 80, both hemispheres
140.7
2130
Female, age 85, both hemispheres
61.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 305.4
2161
Male, age 80, both hemispheres
568.1
2359
Male, age 61, both hemispheres
463.2
2456
Female, age 91, both hemispheres
352.4
1959
Male, age 76, both hemispheres
193.4
2449
Male, age 74, both hemispheres
139.1
2840
Female, age 85, both hemispheres
116.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
