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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2V1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
139.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
124.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
123.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
113.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
111.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
108.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
108.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
103.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
102.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
102.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
97.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
97.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
95.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
93.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
92.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
91.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
90.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
89.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
88.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
88.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
87.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
85.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
84.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
84.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
84.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
84.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
82.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
81.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
81.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
81.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
80.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
78.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
77.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
77.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
77.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
77.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
76.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
76.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
75.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
75.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
74.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
74.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
74.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
73.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
73.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
71.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
71.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
70.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
70.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
70.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
70.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
70.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
70.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
69.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
69.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
68.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
68.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
67.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
67.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
66.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
66.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
66.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
66.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
65.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
65.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
65.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
65.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
65.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
65.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
64.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
64.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
64.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
64.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
64.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
64.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
64.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
64.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
64.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
63.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
63.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
62.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
62.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
61.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
61.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
61.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
61.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
61.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
61.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
61.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
60.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
60.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
60.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
60.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
60.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
60.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
59.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
59.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
59.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
59.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
59.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
59.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
58.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
58.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
58.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
58.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
58.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
57.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
57.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
57.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
57.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
57.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
56.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
56.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
56.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
56.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
56.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
55.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
55.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
55.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
55.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
54.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
54.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
54.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
54.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
54.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
54.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
53.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
53.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
52.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
52.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
52.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
52.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
52.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
52.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
52.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
52.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
52.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
52.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
52.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
51.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
51.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
51.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
51.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
51.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
51.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
51.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
50.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
50.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
50.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
50.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
50.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
50.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
50.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
50.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
50.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
49.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
49.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
49.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
49.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
48.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
48.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
48.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
48.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
48.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
47.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
47.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
47.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
47.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
47.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
47.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
47.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
47.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
47.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
47.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
47.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
47.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
47.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
47.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
47.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
46.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
46.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
46.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
46.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
46.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
46.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
45.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
45.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
45.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
45.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
45.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
45.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
45.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
45.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
45.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
44.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
44.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
44.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
44.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
44.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
44.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
44.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
44.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
44.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
44.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
43.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
43.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
43.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
43.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
43.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
43.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
43.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
43.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
43.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
43.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
42.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
42.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
42.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
42.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
42.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
42.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
42.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
42.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
42.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
41.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
41.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
41.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
41.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
41.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
41.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
41.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
41.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
40.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
40.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
40.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
40.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
40.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
40.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
40.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
40.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
40.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
39.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
39.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
39.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
39.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
39.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
39.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
39.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
39.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
39.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
39.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
38.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
38.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
38.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
38.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
38.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
38.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
38.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
38.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
38.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
37.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
37.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
37.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
37.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
37.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
37.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
37.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
37.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
37.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
36.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
36.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
36.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
36.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
36.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
36.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
36.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
36.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
36.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
36.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
36.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
36.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
36.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
36.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
35.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
35.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
35.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
35.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
35.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
35.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
35.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
34.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
34.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
34.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
34.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
34.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
34.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
34.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
34.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
34.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
34.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
33.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
33.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
33.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
33.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
33.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
32.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
32.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
32.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
32.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
32.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
32.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
32.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
32.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
32.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
32.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
31.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
31.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
31.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
31.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
31.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
30.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
30.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
30.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
30.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
30.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
30.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
29.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
29.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
29.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
28.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
28.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
28.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
28.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
28.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
28.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
28.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
27.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
26.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
26.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
26.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
26.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
26.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
25.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
25.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
25.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
25.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
24.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
24.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
23.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
23.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
23.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
22.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
22.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
21.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
21.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
19.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2V1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.9
Number of samples
231
Samples
Sample
Description
TPM
DO23552
0 years, female, NA, stage:1, alive, 810 days
112.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
104.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
96.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
96.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
93.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
87.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
86.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
86.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
85.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
83.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
82.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
82.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
82.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
79.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
79.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
77.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
77.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
77.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
76.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
75.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
75.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
74.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
74.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
74.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
73.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
72.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
72.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
72.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
71.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
71.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
70.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
68.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
68.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
66.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
66.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
65.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
64.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
64.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
64.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
64.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
63.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
63.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
63.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
63.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
63.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
63.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
62.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
62.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
62.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
62.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
61.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
61.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
60.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
60.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
60.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
60.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
59.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
59.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
59.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
59.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
59.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
59.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
59.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
59.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
58.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
58.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
58.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
58.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
58.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
57.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
57.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
57.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
56.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
55.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
55.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
55.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
55.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
55.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
54.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
54.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
54.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
54.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
54.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
53.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
53.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
53.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
53.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
53.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
53.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
52.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
52.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
52.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
51.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
51.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
51.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
51.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
51.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
51.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
50.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
50.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
50.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
50.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
50.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
50.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
50.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
50.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
50.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
50.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
50.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
50.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
49.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
49.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
49.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
49.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
49.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
48.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
47.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
47.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
47.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
47.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
47.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
47.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
46.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
46.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
46.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
46.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
46.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
46.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
46.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
46.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
46.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
46.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
46.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
45.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
45.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
45.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
45.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
45.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
45.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
44.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
43.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
43.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
43.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
43.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
43.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
43.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
42.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
42.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
42.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
42.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
42.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
42.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
41.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
41.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
40.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
40.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
40.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
40.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
40.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
40.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
40.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
40.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
40.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
40.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
39.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
39.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
39.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
39.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
39.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
39.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
38.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
38.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
38.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
38.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
37.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
37.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
37.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
37.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
37.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
37.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
37.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
37.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
37.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
37.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
37.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
36.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
36.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
36.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
36.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
36.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
36.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
36.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
36.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
36.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
35.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
35.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
35.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
35.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
35.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
35.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
34.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
34.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
34.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
34.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
34.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
34.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
34.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
34.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
33.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
33.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
33.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
33.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
33.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
33.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
32.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
31.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
31.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
30.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
29.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
29.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
29.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
29.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
26.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
26.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
25.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
25.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
24.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
23.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
23.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.