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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM12 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
45.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
45.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
39.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
32.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
30.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
28.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
27.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
24.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
23.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
22.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM12 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
48.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
44.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
41.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
39.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
38.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
38.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
37.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
37.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
37.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
34.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
34.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
33.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
33.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
31.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
31.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
31.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
30.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
30.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
30.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
29.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
29.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
29.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
28.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
28.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
28.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
25.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
25.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
24.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
24.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
24.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
23.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
23.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
22.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
20.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
20.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
20.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
20.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
19.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
19.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
18.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
18.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
17.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
17.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
17.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
15.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
12.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM12 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
50.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
45.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
38.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
36.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
33.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
29.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
28.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
26.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
24.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
11.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
76.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
69.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
56.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
51.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
47.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
46.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
44.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
44.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
44.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
42.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
42.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
39.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
38.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
34.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
28.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
27.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
27.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
20.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
17.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
17.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
17.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
16.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
13.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
5.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.5
CPT0001340003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0017410003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0009060003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0078990003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0025350003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0026410003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025170003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0001230001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0069000003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0089480003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0026420001
Normal
-0.3
CPT0002270011
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
