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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
184.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
48.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
24.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB5 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
278.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
262.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
218.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
196.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
184.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
182.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
179.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
175.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
167.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
164.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
163.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
156.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
154.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
152.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
150.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
149.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
147.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
147.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
146.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
143.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
142.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
133.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
133.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
132.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
131.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
129.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
128.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
128.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
126.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
124.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
124.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
123.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
122.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
122.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
120.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
119.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
119.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
118.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
117.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
117.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
116.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
116.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
115.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
114.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
113.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
113.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
113.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
112.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
111.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
111.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
111.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
110.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
110.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
110.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
109.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
107.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
107.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
105.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
105.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
104.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
103.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
103.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
102.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
102.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
101.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
101.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
101.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
100.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
100.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
99.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
99.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
97.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
96.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
95.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
95.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
94.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
94.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
92.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
92.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
91.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
91.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
90.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
90.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
89.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
89.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
89.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
89.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
89.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
89.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
89.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
89.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
88.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
88.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
88.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
87.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
87.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
87.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
86.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
86.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
86.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
86.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
85.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
85.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
85.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
84.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
84.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
83.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
83.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
83.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
81.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
81.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
80.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
79.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
79.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
79.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
79.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
79.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
77.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
77.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
76.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
75.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
75.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
75.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
75.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
73.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
73.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
73.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
72.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
72.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
71.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
71.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
71.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
71.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
70.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
70.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
70.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
70.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
70.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
69.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
69.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
69.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
68.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
68.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
68.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
68.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
67.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
67.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
67.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
67.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
67.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
66.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
66.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
66.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
66.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
65.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
64.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
64.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
64.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
64.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
64.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
63.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
63.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
63.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
62.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
62.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
62.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
61.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
61.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
61.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
61.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
60.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
60.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
60.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
60.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
60.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
59.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
58.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
58.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
58.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
58.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
57.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
57.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
56.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
56.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
56.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
55.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
54.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
54.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
54.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
54.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
53.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
53.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
53.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
53.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
53.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
51.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
51.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
51.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
49.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
49.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
48.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
47.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
47.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
47.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
46.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
46.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
45.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
45.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
44.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
44.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
43.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
43.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
42.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
42.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
42.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
42.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
41.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
41.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
41.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
41.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
40.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
40.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
39.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
39.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
38.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
38.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
38.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
37.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
37.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
37.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
36.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
36.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
36.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
36.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
36.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
36.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
36.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
36.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
36.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
35.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
34.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
33.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
33.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
33.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
33.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
32.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
32.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
31.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
30.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
30.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
29.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
29.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
28.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
27.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
26.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
26.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
24.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
23.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
22.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
21.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
20.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
20.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
18.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
17.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
15.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
8.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
7.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
7.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
2.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
100.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
86.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
86.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
75.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
74.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
73.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
71.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
67.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
67.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
64.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
62.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
61.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
59.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
59.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
59.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
58.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
57.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
56.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
54.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
53.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
53.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
53.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
52.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
49.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
48.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
46.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
46.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
44.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
44.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
43.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
43.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
42.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
41.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
41.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
41.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
36.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
35.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
33.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
30.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
29.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
28.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
24.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
20.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPIPB5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
248.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
225.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
224.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
202.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
200.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
200.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
187.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
176.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
176.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
165.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
161.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
159.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
140.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
140.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
132.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
122.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
116.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
108.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
107.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
103.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
103.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
98.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
98.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
97.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
91.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
91.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
89.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
88.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
86.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
85.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
85.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
84.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
84.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
82.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
81.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
81.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
81.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
78.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
73.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
73.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
73.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
72.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
72.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
67.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
67.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
66.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
65.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
65.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
64.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
63.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
62.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
62.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
61.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
59.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
58.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
56.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
55.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
54.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
53.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
53.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
51.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
51.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
50.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
50.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
49.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
48.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
47.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
47.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
47.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
46.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
46.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
45.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
45.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
44.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
44.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
43.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
41.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
41.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
41.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
34.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
32.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
32.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
32.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
30.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
24.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
22.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
22.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
21.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
15.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
2.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
2.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
1.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
1.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
