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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
301.4
nTPM
HPA Brain:
139.3
nTPM
GTEx:
301.4
nTPM
FANTOM5:
112.4
Scaled Tags Per Million
Pig:
112.5
nTPM
Mouse:
174.1
nTPM
Allen mouse:
6.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.3
Sample id
Sample description
nTPM
Amygdala nTPM: 139.3
2695
Female, age 67, right hemisphere
160.3
2814
Male, age 76, right hemisphere
145.9
2514
Male, age 75, right hemisphere
132.5
1987
Female, age 91, left hemisphere
131.9
2517
Female, age 94, left hemisphere
125.9
Basal amygdala nTPM: 119.3
2110
Male, age 80, left hemisphere
132.9
2827
Female, age 67, right hemisphere
124.2
2609
Male, age 75, right hemisphere
123.3
2243
Female, age 91, right hemisphere
118.8
2685
Female, age 94, left hemisphere
109.2
1955
Male, age 76, both hemispheres
107.6
Central amygdala nTPM: 128.7
2826
Female, age 94, left hemisphere
163.4
2515
Male, age 75, right hemisphere
141.6
1905
Male, age 76, both hemispheres
130.7
2239
Male, age 80, left hemisphere
107.9
2701
Female, age 91, right hemisphere
99.9
Corticomedial amygdala nTPM: 117.9
2829
Male, age 80, left hemisphere
138.1
2428
Male, age 75, right hemisphere
129.5
2242
Female, age 91, right hemisphere
127.3
2535
Female, age 67, right hemisphere
105.3
2240
Male, age 76, both hemispheres
104.3
2429
Female, age 94, left hemisphere
103.0
Lateral amygdala nTPM: 127.0
2830
Female, age 67, right hemisphere
145.0
2534
Female, age 94, left hemisphere
143.7
1883
Male, age 76, both hemispheres
134.3
2516
Male, age 75, right hemisphere
133.5
2256
Male, age 80, left hemisphere
108.8
2255
Female, age 91, right hemisphere
97.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
301.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 301.4
Samples: 152
Max nTPM: 943.5
Min nTPM: 138.9
Std nTPM: 97.3
Median nTPM: 287.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
943.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
664.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
652.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
574.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
543.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
505.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
478.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
471.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
443.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
440.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
428.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
426.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
424.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
418.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
406.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
398.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
389.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
387.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
385.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
385.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
373.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
369.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
361.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
360.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
354.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
352.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
351.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
350.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
347.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
337.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
337.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
336.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
334.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
333.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
329.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
326.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
322.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
320.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
319.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
319.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
317.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
316.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
315.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
315.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
312.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
312.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
310.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
308.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
308.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
307.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
305.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
304.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
304.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
301.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
301.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
301.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
300.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
300.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
299.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
298.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
297.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
297.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
296.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
296.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
296.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
296.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
294.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
294.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
293.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
293.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
291.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
291.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
290.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
290.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
290.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
287.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
287.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
287.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
283.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
283.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
281.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
280.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
277.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
277.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
275.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
273.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
272.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
272.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
272.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
272.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
271.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
268.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
266.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
265.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
264.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
264.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
264.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
263.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
262.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
261.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
261.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
260.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
259.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
259.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
257.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
257.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
257.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
257.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
257.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
256.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
253.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
252.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
252.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
251.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
249.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
248.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
248.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
245.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
245.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
244.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
244.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
244.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
243.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
240.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
235.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
234.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
231.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
231.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
228.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
219.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
219.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
218.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
217.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
215.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
215.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
212.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
212.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
207.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
207.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
205.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
204.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
201.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
199.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
198.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
197.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
195.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
192.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
187.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
187.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
179.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
172.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
138.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
174.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 174.1
Samples: 4
Max nTPM: 181.4
Min nTPM: 161.0
Sample A
Male
161.0
Sample B
Male
181.4
Sample C
Female
179.6
Sample D
Female
174.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.