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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
85.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
74.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
4.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
3.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
2510.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2480.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
899.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
769.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
703.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
679.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
636.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
615.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
600.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
516.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
456.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
451.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
440.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
435.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
411.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
375.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
326.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
321.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
315.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
296.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
294.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
279.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
279.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
265.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
262.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
259.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
254.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
251.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
249.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
241.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
236.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
235.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
227.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
225.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
201.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
200.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
180.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
178.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
178.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
178.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
172.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
171.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
160.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
159.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
157.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
145.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
141.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
140.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
139.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
136.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
135.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
134.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
134.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
125.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
125.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
124.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
118.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
117.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
116.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
114.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
113.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
111.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
111.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
110.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
109.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
108.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
107.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
107.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
103.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
102.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
101.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
99.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
97.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
96.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
96.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
96.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
93.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
93.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
90.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
90.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
88.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
88.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
87.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
87.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
83.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
83.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
79.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
76.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
76.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
76.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
74.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
72.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
71.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
69.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
69.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
64.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
64.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
61.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
61.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
59.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
57.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
56.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
56.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
55.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
55.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
54.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
52.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
48.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
48.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
48.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
48.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
47.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
47.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
44.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
43.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
38.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
38.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
38.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
36.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
33.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
32.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
32.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
32.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
31.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
30.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
29.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
27.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
26.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
20.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
10.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
9.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
8.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
7.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
7.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
7.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
6.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
6.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
6.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
6.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
6.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
6.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
6.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
6.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
5.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
5.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
5.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
5.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
5.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
5.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
5.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
5.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
5.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
5.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
5.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
5.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
5.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
4.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
4.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
4.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
4.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
4.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
4.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
4.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
4.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
4.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
4.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
3.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
3.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
3.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
3.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
3.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
3.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
3.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
3.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
3.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
3.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
3.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
3.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
3.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
3.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
3.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
3.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
3.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
3.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
3.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
2.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
2.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
2.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
2.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
2.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
2.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
2.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
2.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
2.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
2.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
2.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
2.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
2.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
2.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
2.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
2.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
2.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
1.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
1.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
1.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
1.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
0.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
0.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
0.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
0.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
744.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
704.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
651.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
353.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
282.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
251.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
218.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
204.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
159.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
134.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
133.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
131.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
121.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
99.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
86.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
69.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
68.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
65.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
58.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
57.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
57.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
56.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
46.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
41.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
23.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
21.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
15.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
7.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
6.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
6.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
6.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
6.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
5.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
5.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
4.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
4.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
4.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
3.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
3.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
2.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
0.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
0.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
887.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
752.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
554.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
531.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
425.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
413.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
376.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
352.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
312.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
265.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
263.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
220.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
181.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
170.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
166.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
151.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
100.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
93.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
84.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
82.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
73.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
67.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
65.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
63.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
62.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
61.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
61.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
57.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
57.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
54.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
52.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
49.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
48.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
46.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
46.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
46.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
43.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
34.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
33.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
30.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
29.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
25.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
5.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
5.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
4.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
3.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
3.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
3.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
3.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
2.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
2.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
0.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
0.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
0.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
0.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
