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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
100.3
nTPM
HPA Brain:
131.4
nTPM
GTEx:
100.3
nTPM
FANTOM5:
40.1
Scaled Tags Per Million
Pig:
23.6
nTPM
Mouse:
19.2
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
131.4
Sample id
Sample description
nTPM
Amygdala nTPM: 126.6
2517
Female, age 94, left hemisphere
137.9
2814
Male, age 76, right hemisphere
134.7
1987
Female, age 91, left hemisphere
129.1
2514
Male, age 75, right hemisphere
126.3
2695
Female, age 67, right hemisphere
105.0
Basal amygdala nTPM: 111.7
2609
Male, age 75, right hemisphere
128.1
2685
Female, age 94, left hemisphere
126.9
2110
Male, age 80, left hemisphere
115.5
1955
Male, age 76, both hemispheres
108.3
2827
Female, age 67, right hemisphere
104.7
2243
Female, age 91, right hemisphere
86.6
Central amygdala nTPM: 131.4
2826
Female, age 94, left hemisphere
205.1
1905
Male, age 76, both hemispheres
142.1
2239
Male, age 80, left hemisphere
112.3
2515
Male, age 75, right hemisphere
111.7
2701
Female, age 91, right hemisphere
85.8
Corticomedial amygdala nTPM: 96.1
2428
Male, age 75, right hemisphere
122.7
2535
Female, age 67, right hemisphere
103.2
2829
Male, age 80, left hemisphere
98.9
2242
Female, age 91, right hemisphere
95.6
2429
Female, age 94, left hemisphere
95.2
2240
Male, age 76, both hemispheres
60.9
Lateral amygdala nTPM: 124.9
2534
Female, age 94, left hemisphere
177.4
2516
Male, age 75, right hemisphere
133.4
1883
Male, age 76, both hemispheres
133.3
2256
Male, age 80, left hemisphere
120.6
2255
Female, age 91, right hemisphere
94.1
2830
Female, age 67, right hemisphere
90.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
100.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 100.3
Samples: 152
Max nTPM: 247.5
Min nTPM: 4.7
Std nTPM: 51.7
Median nTPM: 90.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
247.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
237.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
213.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
212.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
210.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
203.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
196.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
193.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
190.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
190.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
188.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
183.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
182.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
181.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
178.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
171.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
169.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
169.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
169.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
168.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
167.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
164.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
164.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
163.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
161.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
160.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
156.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
156.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
154.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
153.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
152.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
151.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
148.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
145.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
144.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
143.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
136.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
131.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
130.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
129.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
129.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
128.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
125.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
123.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
119.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
119.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
119.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
118.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
117.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
117.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
116.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
116.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
115.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
115.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
115.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
114.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
111.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
110.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
110.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
108.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
108.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
107.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
105.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
105.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
104.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
103.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
102.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
101.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
99.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
99.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
97.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
97.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
96.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
96.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
95.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
91.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
90.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
89.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
89.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
87.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
87.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
86.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
86.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
85.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
84.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
83.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
81.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
78.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
78.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
76.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
75.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
73.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
73.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
73.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
73.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
72.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
71.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
70.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
68.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
68.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
68.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
68.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
67.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
67.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
67.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
66.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
66.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
66.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
65.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
64.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
63.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
62.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
61.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
61.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
61.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
61.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
57.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
55.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
55.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
54.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
54.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
54.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
52.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
51.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
50.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
50.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
49.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
46.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
46.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
41.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
40.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
40.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
40.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
36.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
32.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
32.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
31.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
31.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
30.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
28.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
23.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
22.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
22.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
15.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
4.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
19.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 19.2
Samples: 4
Max nTPM: 32.4
Min nTPM: 12.1
Sample A
Male
17.0
Sample B
Male
15.4
Sample C
Female
32.4
Sample D
Female
12.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.