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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
11.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
2.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-33 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4103.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
2308.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1799.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1264.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1214.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1171.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
978.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
922.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
897.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
761.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
709.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
639.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
581.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
485.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
471.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
432.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
424.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
421.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
418.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
357.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
321.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
317.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
307.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
299.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
295.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
288.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
264.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
261.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
230.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
226.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
223.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
222.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
203.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
201.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
200.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
195.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
177.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
173.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
168.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
166.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
164.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
159.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
157.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
145.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
142.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
142.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
141.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
137.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
135.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
131.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
130.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
125.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
121.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
119.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
117.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
116.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
112.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
110.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
109.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
108.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
108.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
102.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
102.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
101.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
100.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
98.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
95.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
94.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
88.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
87.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
86.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
86.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
85.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
81.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
79.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
79.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
74.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
70.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
69.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
68.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
66.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
66.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
65.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
63.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
61.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
60.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
59.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
56.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
56.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
55.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
53.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
52.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
51.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
51.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
49.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
48.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
47.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
47.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
47.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
46.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
44.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
42.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
41.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
41.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
41.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
40.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
39.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
38.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
38.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
37.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
36.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
36.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
33.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
33.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
32.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
31.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
29.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
27.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
27.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
26.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
24.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
21.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
20.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
16.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
11.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
10.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
9.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
7.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
7.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
7.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
7.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
7.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
7.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
7.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
6.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
6.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
6.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
6.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
6.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
6.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
6.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
5.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
5.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
5.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
5.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
5.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
5.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
5.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
5.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
5.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
5.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
5.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
5.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
5.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
5.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
5.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
4.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
4.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
4.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
4.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
4.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
4.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
4.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
4.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
4.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
4.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
4.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
4.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
4.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
3.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
3.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
3.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
3.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
3.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
3.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
3.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
3.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
3.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
3.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
3.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
3.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
3.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
2.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
2.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
2.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
2.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
2.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
2.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
2.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
2.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
2.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
2.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
2.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
2.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
2.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
2.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
2.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
2.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
2.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
2.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
2.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
2.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
2.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
2.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
2.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
1.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
1.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
1.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
1.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
1.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
1.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
1.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
1.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
1.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
1.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
0.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
0.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
0.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
0.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
0.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
0.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
0.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
0.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
0.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
0.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-33 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
769.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
738.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
646.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
569.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
410.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
296.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
232.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
192.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
178.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
164.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
103.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
101.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
84.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
74.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
71.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
71.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
61.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
40.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
37.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
37.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
10.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
8.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
7.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
6.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
6.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
6.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
6.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
5.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
5.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
5.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
5.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
5.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
4.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
4.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
4.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
3.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
3.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
3.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
3.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
3.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
3.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
2.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
2.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
2.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
2.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
1.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
0.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
0.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
0.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
0.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
0.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
0.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGKV1-33 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1232.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
706.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
559.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
559.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
315.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
296.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
208.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
187.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
140.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
129.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
119.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
111.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
106.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
87.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
86.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
83.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
69.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
61.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
61.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
61.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
57.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
56.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
53.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
51.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
45.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
40.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
31.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
30.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
23.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
6.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
6.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
6.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
5.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
4.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
4.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
3.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
2.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
2.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
2.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
2.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
1.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
0.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
0.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
0.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
0.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.