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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
High
Neuronal cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
9.9
nTPM
HPA Brain:
12.5
nTPM
GTEx:
9.9
nTPM
FANTOM5:
33.2
Scaled Tags Per Million
Pig:
11.1
nTPM
Mouse:
7.4
nTPM
Allen mouse:
9.9
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA006312
Antibody HPA016995
Glial cells
High
Not detected
Neuronal cells
High
Medium
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
12.5
Sample id
Sample description
nTPM
Hippocampus nTPM: 11.8
2148
Female, age 91, left hemisphere
13.1
2529
Female, age 94, left hemisphere
12.9
1855
Male, age 76, left hemisphere
12.8
1911
Female, age 85, right hemisphere
11.8
2621
Female, age 67, right hemisphere
11.6
1898
Male, age 80, left hemisphere
8.9
Dentate gyrus nTPM: 12.4
2531
Female, age 67, both hemispheres
14.3
2010
Male, age 76, both hemispheres
13.6
2246
Female, age 85, both hemispheres
13.2
2530
Female, age 94, left hemisphere
12.1
1927
Female, age 91, both hemispheres
11.0
2528
Male, age 74, both hemispheres
10.1
Entorhinal gyrus nTPM: 11.8
1938
Female, age 85, left hemisphere
13.3
2686
Male, age 75, right hemisphere
12.6
2764
Male, age 80, right hemisphere
11.9
2117
Female, age 91, right hemisphere
11.4
1787
Male, age 76, left hemisphere
10.8
2613
Female, age 94, left hemisphere
10.6
Hippocampus, CA1 nTPM: 11.8
2045
Male, age 76, both hemispheres
13.8
2082
Female, age 91, right hemisphere
12.2
2749
Male, age 80, left hemisphere
11.6
1873
Female, age 85, both hemispheres
11.2
2527
Male, age 74, both hemispheres
10.4
Hippocampus, CA2 nTPM: 11.6
1892
Male, age 76, both hemispheres
13.7
1940
Female, age 85, left hemisphere
12.0
2113
Female, age 91, right hemisphere
11.9
2437
Female, age 94, left hemisphere
11.7
2249
Male, age 74, both hemispheres
10.6
1963
Male, age 80, left hemisphere
9.9
Hippocampus, CA3 nTPM: 12.3
2861
Female, age 67, both hemispheres
14.7
2620
Female, age 94, left hemisphere
13.8
1867
Male, age 76, both hemispheres
12.7
1891
Female, age 85, both hemispheres
12.3
2137
Male, age 80, left hemisphere
11.3
2436
Male, age 74, both hemispheres
9.2
Parahippocampal cortex nTPM: 11.8
2622
Female, age 67, right hemisphere
13.9
2245
Female, age 91, both hemispheres
13.1
1850
Male, age 80, both hemispheres
12.5
2532
Female, age 72, left hemisphere
12.3
2018
Male, age 76, both hemispheres
11.8
2693
Female, age 94, both hemispheres
11.5
2692
Male, age 74, both hemispheres
11.4
1990
Female, age 91, right hemisphere
11.2
2250
Female, age 67, right hemisphere
10.0
1933
Female, age 85, both hemispheres
9.7
Perirhinal gyrus nTPM: 10.9
1794
Male, age 80, right hemisphere
11.9
2848
Male, age 76, right hemisphere
11.4
1841
Female, age 85, right hemisphere
11.3
2521
Female, age 94, right hemisphere
10.5
1847
Female, age 91, left hemisphere
9.5
Subiculum nTPM: 12.5
2042
Male, age 76, both hemispheres
14.7
2438
Female, age 94, left hemisphere
14.0
1901
Male, age 80, both hemispheres
12.7
1977
Female, age 85, both hemispheres
11.9
2729
Female, age 91, right hemisphere
11.5
2619
Male, age 74, both hemispheres
10.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 9.9
Samples: 197
Max nTPM: 21.7
Min nTPM: 5.1
Std nTPM: 1.8
Median nTPM: 10.0
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
21.7
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
14.8
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
14.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
13.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
13.4
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
13.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
13.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
13.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
13.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
12.9
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
12.8
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
12.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
12.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
12.4
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
12.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
12.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
12.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
12.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
11.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
11.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
11.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
11.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
11.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
11.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
11.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
11.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
11.6
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
11.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
11.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
11.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
11.4
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
11.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
11.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
11.3
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
11.2
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
11.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
11.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
11.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
11.1
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
11.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
11.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
11.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
10.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
10.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
10.9
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
10.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
10.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
10.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
10.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
10.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
10.8
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
10.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
10.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
10.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
10.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
10.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
10.7
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
10.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
10.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
10.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
10.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
10.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
10.7
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
10.7
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
10.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
10.6
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
10.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
10.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
10.6
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
10.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
10.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
10.5
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
10.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
10.5
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
10.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
10.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
10.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
10.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
10.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
10.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
10.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
10.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
10.3
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
10.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
10.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
10.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
10.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
10.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
10.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
10.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
10.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
10.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
10.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
10.1
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
10.1
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
10.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
10.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
10.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
10.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
10.0
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
10.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
9.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
9.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
9.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
9.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
9.9
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
9.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
9.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
9.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
9.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
9.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
9.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
9.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
9.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
9.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
9.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
9.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
9.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
9.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
9.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
9.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
9.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
9.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
9.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
9.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
9.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
9.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
9.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
9.3
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
9.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
9.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
9.2
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
9.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
9.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
9.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
8.9
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
8.9
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
8.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
8.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
8.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
8.8
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
8.8
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
8.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
8.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
8.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
8.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
8.7
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
8.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
8.6
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
8.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
8.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
8.6
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
8.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
8.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
8.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
8.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
8.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
8.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
8.3
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
8.3
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
8.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
8.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
8.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
8.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
8.1
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
8.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
8.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
8.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
8.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
7.9
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
7.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
7.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
7.8
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
7.8
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
7.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
7.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
7.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
7.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
7.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
7.5
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
7.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
7.3
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
7.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
7.3
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
7.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
7.0
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
7.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
7.0
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
7.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
6.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
6.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
6.6
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
6.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
5.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
5.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
5.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
5.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7.4
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 7.4
Samples: 4
Max nTPM: 7.7
Min nTPM: 7.2
Sample A
Male
7.4
Sample B
Male
7.2
Sample C
Female
7.7
Sample D
Female
7.2
Hippocampal formation nTPM: 7.0
Samples: 4
Max nTPM: 7.4
Min nTPM: 6.4
Sample A
Male
7.4
Sample B
Male
6.9
Sample C
Female
7.4
Sample D
Female
6.4
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
